Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq4241 96.9 6e-18 seq5078 84.2 4e-14 >seq4241 Length=507456 Score = 96.9 bits (106), Expect = 6e-18 Identities = 148/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 80 ATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCT 139 ||||| | | || | || |||||||| ||| | || |||||||| || || | || Sbjct 213517 ATCCATCTTAAGTGCGGCGAGGAAGGCG-CTTTGCGGGATTTCCACCTTACCAAACTGCC 213459 Query 140 TCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCAC 199 |||||| ||||| || |||| || || || |||||||||||||||||| | |||| Sbjct 213458 GCATGCGCTTTTTCCCTTCCTTCTGTTTTTCCAGCAGCTTGCGCTTACGGGAGATATCAC 213399 Query 200 CGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGA 259 |||| || ||||||||| || | ||| || || || || |||||||| | Sbjct 213398 CGCCATAACATTTGGCCGTCACATCCTTGGAAAGTGCGCCGATGGTTTCACGCGCAATCA 213339 Query 260 TCTGCCCGCCAATGGCGGCCTGGATCGCGA 289 || | ||||||||| ||||| || |||| Sbjct 213338 CCTTGCTGCCAATGGCAGCCTGAATGGCGA 213309 >seq5078 Length=1488007 Score = 84.2 bits (92), Expect = 4e-14 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149 ||| | || | |||||| ||| | ||||||||||| || || | || |||||| || Sbjct 701151 AGCGCAGCCAAGAAGGCG-CTTTGCGGAATTTCCACCTTACCAAACTGCCGCATGCGCTT 701209 Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209 |||||| |||| ||||| || || || |||||||||||| | ||||| || || || Sbjct 701210 TTTACCTTCCTTCTGCTTTTCCAGAAGTTTGCGCTTACGGGAGATATCACCACCATAACA 701269 Query 210 TTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCC 269 |||||| ||| | ||| || || | || |||||||| | || | ||| Sbjct 701270 CTTGGCCGTTACATCCTTGGAAAGTGCGCCAATGGTTTCACGCGCAATCACCTTACTGCC 701329 Query 270 AATGGCGGCCTGGATCGC 287 |||||| ||||| || || Sbjct 701330 AATGGCCGCCTGAATGGC 701347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838354483264