Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq5079 138 3e-30 >seq5079 Length=1084440 Score = 138 bits (152), Expect = 3e-30 Identities = 107/126 (85%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 375 GATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAAT 434 ||| |||||||||| | || |||||||||||||||| ||||||||||||||||||||| Sbjct 997677 GATGATGACGGTACCCGCAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAAT 997736 Query 435 ACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCT 494 ||| |||||||||||||| |||||| ||| |||||||||||| | ||||| ||||| | Sbjct 997737 ACGAAGGGGGCTAGCGTTGCTCGGAATGACT-GGGCGTAAAGGGCGTGTAGGCGGTTTGT 997795 Query 495 TAAGTC 500 |||| Sbjct 997796 ACAGTC 997801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497518695296