Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq5079 365 1e-98 >seq5079 Length=1084440 Score = 365 bits (404), Expect = 1e-98 Identities = 324/401 (81%), Gaps = 3/401 (1%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 997696 GAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTG 997755 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 |||||| ||||||||||||||| | ||||| ||||| | ||||||| |||||| | Sbjct 997756 CTCGGAATGACTGGGCGTAAAGGGCGTGTAGGCGGTTTGTACAGTCAGATGTGAAATCCC 997815 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAAC-TGCAGGGCTAGAGTGCAGGAGGGGCAAGT 187 |||| |||| || |||| ||||| || |||| | |||||||| ||| || || Sbjct 997816 CGGGCTTAACCTGGGAGCTGCATTTGATACGTGCA-GACTAGAGTGTGAGAGAGGGTTGT 997874 Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247 |||||||| ||||||| |||||||| |||||||||| ||| ||||||| ||||||||||| Sbjct 997875 GGAATTCCCAGTGTAGAGGTGAAATTCGTAGATATTGGGAAGAACACCGGTGGCGAAGGC 997934 Query 248 GGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307 ||| |||| | |||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 997935 GGCAACCTGGCTCATGACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGA 997994 Query 308 TACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCC 367 |||||||||||||||||| |||||||||| | || | ||| || | | ||| | | Sbjct 997995 TACCCTGGTAGTCCACGCTGTAAACGATGTGTGCTGGATGT-TGGACAACTTAGTTGTTC 998053 Query 368 GGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| || ||| ||||| ||||| | || ||||||||||| Sbjct 998054 AGTGTCGTAGCTAACGCGATAAGCACACCGCCTGGGGAGTA 998094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203134678272