Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq5214 619 1e-172
seq5242 443 2e-119
>seq5214
Length=3698012
Score = 619 bits (686), Expect = 1e-172
Identities = 1258/1854 (68%), Gaps = 33/1854 (2%)
Strand=Plus/Plus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||| || |||||||| ||||| || ||||| | ||| || | |||||||||||||||||
Sbjct 3420203 ATCCACGGTGAACTGAATCGCGTTCGCAGCTGGCTTTGTGCGCAGATAGTACATGCCGGT 3420262
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196
|||||||||||| ||| | || || || || || | | ||| | || ||||||||
Sbjct 3420263 CTTGAGGCCAGCTTTCCAGGAGTAAAAGTGAATGGACGTCAGTTTGCCGTAGTTCGGCTC 3420322
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCA 65255
|||||||| || || ||||||||||| || |||||| |||| |||||||||||| ||||
Sbjct 3420323 TGCCACATGAATGTTGAACGACTGACTTTGGTCGATG-AACGCACCACGATCTGCGGCCA 3420381
Query 65256 TGTCAATGATACGACGTCCCG-ATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314
| | ||| | ||| || || | || ||||| ||||||||||| || || ||||
Sbjct 3420382 TTTTAATTGTG-GACTTCACGGAGATTTCCCACACGGTCTTGTAAAGATCGCGAACCTTC 3420440
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
||||| ||||||||| ||||| |||||| | | | ||| || | || |||
Sbjct 3420441 TGGGGAATGGCCTCAATGTTCTGGATTGAACCCCTGCTGGAAATGATCTGGTTCTTCATA 3420500
Query 65375 GACTCTGACCACAAACCCAAATCGAT-AAGATGTTGAACCAAGTGACGATTGATGACTTG 65433
|| ||||||| ||| ||| | ||| | ||| || ||| | |||| || ||
Sbjct 3420501 TCGTCGTCCCACAAATCCAGCTCGGTTAAGTCCCTCAACAAA-TGATGGTTGACCACCTG 3420559
Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493
||| || |||||||| || || ||| || ||||| | ||| ||| || || |||||
Sbjct 3420560 GAATTCACCGGACAGAACGCGCCGGGTGTAAATGTTAGTTGTGTAGGGCTCGAAAGATTC 3420619
Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553
||||||| | ||||||||||| ||||| || |||||||| || |||| || |||||
Sbjct 3420620 GTTGTTGCCCATTATTTGGGCAGTGGATGCCGTGGGCATGGGTGCAACCAGCAGGGAGTT 3420679
Query 65554 TCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATC 65613
| | |||| | | ||| | || || | ||| | ||||| ||| |
Sbjct 3420680 CCTGACACCGTGCTGCTTGATGGACTCCTTCAGTTTCTGCCAATCCCACA--GGTC---C 3420734
Query 65614 GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673
|| | | || | |||||| || | ||||| |||| | || | || ||
Sbjct 3420735 GTGGGCTTCTT-GTCCCACATGTCGTACTGCAGAATTCCCTTGCTCACGGGGCTGCCCTC 3420793
Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAA 65733
| | | || || || || ||| || || | |||||||| || | ||| | |
Sbjct 3420794 GTAGGTTTCATAGGGACCTTCGACCTGCGCCAGCTCACAGCTGGCTTCCAAGGCGCCGTA 3420853
Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793
|||||||| ||||| || | |||| | || || || ||||| ||||| || |
Sbjct 3420854 GTAAATGGTTTCGAATATCTGCTGATTCAAAAGACCGGCTTCCTCGCTTTCGTATGGGAA 3420913
Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853
| ||| || | | | ||| || | ||| || || || || || | |||||||| |
Sbjct 3420914 TCGCATGAGAATCAGGGCGTCAGCGAAACCCTGGACACCGATGCCCACCGGACGATGCCT 3420973
Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913
|||||| || | | ||| || | || || | ||||| || || || || |
Sbjct 3420974 CAAATTAGATTTCTTTGTCTCTGGCAGGGGATAAAAGTTGATGTCAATTATCTTGTTGAG 3421033
Query 65914 ATTGCGTGTCACCA-CATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGG 65970
||| | || ||| | || | || || || || || ||||||| | ||
Sbjct 3421034 ATTTCTGGTAACCGTCTTG---GTGACTTCCTTCAGTTTTTTGAAATCATACGTCTTC-- 3421088
Query 65971 ACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGAC 66030
||||| ||| || ||| ||| ||||||| ||||| |||||||| ||
Sbjct 3421089 ----TCGGGCGTGACGAACATG------TTG---AGGGCAATGGATGCCAGGTTGCACAC 3421135
Query 66031 AGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTAT 66090
|| |||||||| || |||| |||||| || ||||||||||||| ||| ||||| ||
Sbjct 3421136 TGCAATCTCGTCCGGCGCGGAATACTCAACGATTTCGGTGCACAAATTGCTGCACTTGAT 3421195
Query 66091 GGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGG 66150
|||||| | |||||| || || ||||| | ||||| | ||||||| ||| |||||||||
Sbjct 3421196 GGTGCCAACATTCTGCTGGTTGCTCTTCCTGTTGCACGAATCCTTGAACAGCATGTACGG 3421255
Query 66151 AGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT 66210
| ||||||| || || || ||||||||||||||| ||| | | ||||||| |||||
Sbjct 3421256 ATTGCCGGTTTCCACCTGCGACTCAATGATGGCGAACCACAAGGACTGTGCCTTGACCGT 3421315
Query 66211 ACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCA 66270
|| ||| | || | | ||||| || ||| || | |||||| || |||||
Sbjct 3421316 CCGGTTCGCACGGCCCTCCTGCTCGTATTGCGTGTACAGCTTTTCGAACTCATCGCCCCA 3421375
Query 66271 TACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTC 66330
|| ||| ||| | || || ||||| ||||||||||||||||| || || | ||
Sbjct 3421376 CACATCGTGCAGGCCGGGGCATTTGTGCGGACACATCAGCGACCAGTCCCCGTTGGCCTC 3421435
Query 66331 TACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTG 66390
|| || ||| || ||||| ||||||||||||||||||||||||||||| || || |
Sbjct 3421436 GACGCGTTTCATGAAAAGATCGGGTATCCAGAGGGCGTAGAAGAGATCGCGGGCGCGATT 3421495
Query 66391 CTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450
|||||| ||||| || || | || |||||||| || | ||| | ||||| ||
Sbjct 3421496 CTCCTCCTTGCCGGTGTTCTTCTTGAGTTCCAGGAACTCGAACACGTCCGAGTGCCAGGG 3421555
Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510
|||||||| |||||||| | || || ||||||||||| || || ||||| || ||
Sbjct 3421556 CTCCAGGTAAATGGCGAAGGCACCGGGCCGCTTGCCGCCACCCTGATCCACGTAACGTGC 3421615
Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570
|||||||||||||| | | ||| ||||| || || || || ||||||| ||||||
Sbjct 3421616 CACATTGTTGAAGACCCTGAGCATGGGTACCAGGCCATTGGAGGTGCCATTCGTGCCGCA 3421675
Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630
||||| || || ||||| || || |||||||| ||||| || || |||| ||
Sbjct 3421676 GATGGAGGTGCCCTTGGCCCGGATGCAATGGACATTCAGTCCAATGCCTCCTGCCGATTT 3421735
Query 66631 CGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690
|||||| || || | |||| | | ||| ||||| || || ||||| || | ||
Sbjct 3421736 CGAGATCATGGCGCACTGTTCCACCGACTTGAAGATGCCCTCGATCGAGTCGGCCGTCAT 3421795
Query 66691 GGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGG 66750
|||||| ||| |||| || ||||| || |||||| || | || || || ||
Sbjct 3421796 GGTCAGCAGGAAGCACGACGACAGTTGCGGCCGATTTGTGGCTGCGGCAAAAAGCGTTGG 3421855
Query 66751 TGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAAT 66810
| ||||| || ||| | | |||| ||||| ||||| | | | ||||| ||
Sbjct 3421856 CGAGGCGTGGGTGAAGAACCGCTCCGACAGCAGGTTGTAGGTCTCCACGGCCGCATCGAT 3421915
Query 66811 GTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAG 66870
|| || ||||| || |||| || |||||||| | || || || || ||| | |
Sbjct 3421916 GTCCTCTCCATGGATTCCGATCGCCACGCGCATCAGCATGTGCTGCGGACGCTCGGCGAT 3421975
Query 66871 CCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924
| | || | | || | ||| || ||||| ||||| || | |||||||||
Sbjct 3421976 CTTTCCGTTTCTCTTCAGCAGGTACGAACGTTCGAGGGTTTTAAAACCAAAGTA 3422029
>seq5242
Length=5320397
Score = 443 bits (490), Expect = 2e-119
Identities = 608/845 (72%), Gaps = 11/845 (1%)
Strand=Plus/Minus
Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165
|||| || || || |||||||| || |||||||| ||| ||||||| ||| ||| ||||
Sbjct 3388514 AGGCTGAGGCCTCTTTCTGGACCGTAGAGGAGGTGGATCTGTCCAAGGACCTGACCGACT 3388455
Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225
|| | || | | || || | || ||||| || ||| |||| ||||||||||
Sbjct 3388454 GGCACCGCCTCAAGGACGACGAGCGTCACTTCATCTCGCACGTGCTGGCCTTCTTTGCCG 3388395
Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285
| || || || |||||||||||||| | |||| || ||| ||||||||||| |
Sbjct 3388394 CCTCCGATGGCATCGTCAATGAGAACCTGGTGGAGCGGTTCAGCCAGGAGGTGCAGATCA 3388335
Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345
||||||| || || ||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct 3388334 CGGAGGCCCGCTGCTTCTACGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 3388275
Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405
|||| || || ||||| || |||||| |||| | | | || || ||||||| |
Sbjct 3388274 ACAGCGTGCTGATCGACACTTACATCCGGGATCCGCACCAGCGGGAGTACCTGTTCAACG 3388215
Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465
||||||||||||| |||||||||||||| || || || ||||| | |||||| ||
Sbjct 3388214 CCATCGAGACGATGCCGGCGGTGAAGCGCAAGGCTGACTGGGCTCTGTCCTGGATCTCC- 3388156
Query 61466 GTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523
| ||| |||| | || || || || | | |||||||| | || ||||| | ||
Sbjct 3388155 -TCCAAGTCGGCCAATTTCGGGGAGCGCATCATCGCATTTGCCGCCGTGGAGGGCATCTT 3388097
Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583
||||| || || ||| | || || ||| ||||||| || || || ||||| || ||
Sbjct 3388096 CTTCAGCGGCAGCTTCGCCTCCATTTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGACT 3388037
Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTT 61643
||||||| ||| ||| |||| || ||||||||||| |||| ||||| || || || |
Sbjct 3388036 GACCTTCTCCAACGAGCTGATCTCCCGCGACGAGGGATTGCACTGTGACTTCGCCGTGCT 3387977
Query 61644 GCTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATTGTT 61701
| | ||| | | | |||||| | || || | || ||||| | ||||| |
Sbjct 3387976 GATGTTCCAGC---ACCTGGTGCAGCGACCCAGACG--CGAGCGCATCATCGAGATCATC 3387922
Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761
|| || ||||| || || ||||| || || || ||||| |||| || ||||||
Sbjct 3387921 CGCGATGCGGTGCTCATTGAGCAGGAGTTCCTCACAGACGCCCTGCCTGTGAACCTCATC 3387862
Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTC 61821
|||||||| |||| || ||||| ||||| ||||| ||||| || || || || ||||
Sbjct 3387861 GGCATGAACTGTGACCTGATGTCCCAGTACATTGAGTTTGTGGCGGATCGCTTGCTGGTG 3387802
Query 61822 GATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATT 61881
|| ||||| | |||||| || || || ||||| || | |||||||| |||||
Sbjct 3387801 GAGTTGGGCGTTGGCAAGATCTACAACACCAAGAACCCGTTCAACTTCATGGAGATGATC 3387742
Query 61882 TCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAACGTTTGGGT 61941
|||||||| |||||||| ||||| |||||||| || ||||| || || || ||||
Sbjct 3387741 TCGCTGGACGGCAAGACCAATTTCTTCGAGAAGAAGGTGGGCGAGTACCAGCGCATGGGC 3387682
Query 61942 GTAGC 61946
|| ||
Sbjct 3387681 GTGGC 3387677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397541694540560
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