Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq4422 91.5 5e-14 >seq4422 Length=139152 Score = 91.5 bits (100), Expect = 5e-14 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 29769 CCAGGGCTGGAAACTGGGCGGGGCCATTAAAACCACCGAGCGCAAACTGGCTGAAGGGGT 29828 |||||||||||| || ||||| || |||||| | || || ||||| |||| | | Sbjct 127386 CCAGGGCTGGAAGCTCACAGGGGCAATCAAAACCGCAGAACGGAAACTTGCTGGACGTAC 127327 Query 29829 GCTGGTGCATGGTGACCAGCCCCTGATGGCCTGGTGTGTCGGCAATGCCCGGGTGGAGCC 29888 ||| | ||| ||| |||||| | ||||| ||| ||||| |||||||| ||||| | Sbjct 127326 TCTGATCCATTGTGGGCAGCCCATCATGGCATGGGCAGTCGGAAATGCCCGTGTGGAAGC 127267 Query 29889 TAAAGGTAACGCCATTCTTATCACCAAACAGGCCAGTGGACGGGGAAAAATTGACCCGCT 29948 ||||| || ||| || | || || |||||| || || ||| || ||||| || Sbjct 127266 GAAAGGAAATGCCGTTGTCATAGAAAAGCAGGCCGCAGGTTGGTCAAAGATAGACCCTCT 127207 Query 29949 GATGGCGCTGTTC 29961 ||| |||| ||| Sbjct 127206 TATGTCGCTTTTC 127194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175534282684884