Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq4674 129 2e-24 >seq4674 Length=694708 Score = 129 bits (142), Expect = 2e-24 Identities = 191/270 (71%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 21632 AACACCCGTGGAGCCATATCCTCCCTCGCCGCGCTTGGTCTCGCCGAGCTCGCCCTTTTG 21691 ||| || |||||||| ||||| |||||||||| | ||| || | || | | || | Sbjct 523749 AACGCCGGTGGAGCCGAATCCTGCCTCGCCGCGTTCGGTGTCCTCCAGTTTGTCCACGAG 523808 Query 21692 CGCCTGCTGCAAAACTGGGGTCGA-GATGCGTTCCAGGATGAGTTGGGCGATGCGATCGC 21750 | || | | | || | || |||||| || |||| |||||||||||||||| Sbjct 523809 CTCCAGTTCC-------GGATAGAAGATGCGCTCGCAAATGAACTGGGCGATGCGATCGC 523861 Query 21751 CATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCC 21810 | |||| | || |||||| ||| ||||| ||||||||||| || |||| ||||| | Sbjct 523862 CGCGCTTCACCTCGAAGTCCACGTCCGAGTGATTGAAGAGCACGACGCCGAGGTTGCCGC 523921 Query 21811 TATAAGAACTGTCGACGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCG 21870 ||| ||| || || |||||||| || |||| |||||||| |||||| || | Sbjct 523922 GGTAATCCTCGTCCACCACGCCGGCGCCCACATCGATGAAGTTCTTCACGGCCAGTCCAG 523981 Query 21871 ATCTGGGAGCGACGCGGCCGTAGTGGCCCT 21900 | | ||||| |||||||||||| ||||| Sbjct 523982 AGCGTGGAGCAACGCGGCCGTAGGAGCCCT 524011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084590650605342