Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_031940.1
Length=77375
Score E
Sequences producing significant alignments: (Bits) Value
seq4422 118 5e-22
>seq4422
Length=139152
Score = 118 bits (130), Expect = 5e-22
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 43231 ATGCCGGATATCGCCGCCGATGCGAAAGCCATTGCGTTTGGTAACTTCAAACGGGGTTAC 43290
||||||||||| || || || | |||||||||| || || ||||| |||| |||
Sbjct 124008 ATGCCGGATATTGCAGCAAGCGCTATCCCCATTGCGTTCGGCAATTTCAAGCGGGCCTAC 123949
Query 43291 ACCATCGTTGACCGTATCGGCACCCGCATCCTGCGCGACCCGTACACCAACAAACCGTTT 43350
| ||||| |||||||| |||| ||| | || || || || ||||||||||| ||||||
Sbjct 123948 ATGATCGTGGACCGTATTGGCATCCGGACGCTTCGGGATCCCTACACCAACAAGCCGTTT 123889
Query 43351 GTCGGTTTTTATACCACCAAGCGCACCGGGGGTAT 43385
|| || ||||| ||||||| |||||||| || ||
Sbjct 123888 GTTGGGTTTTACGCCACCAAACGCACCGGTGGGAT 123854
Score = 118 bits (130), Expect = 5e-22
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 3646 ATGCCGGATATCGCCGCCGATGCGAAAGCCATTGCGTTTGGTAACTTCAAACGGGGTTAC 3705
||||||||||| || || || | |||||||||| || || ||||| |||| |||
Sbjct 124008 ATGCCGGATATTGCAGCAAGCGCTATCCCCATTGCGTTCGGCAATTTCAAGCGGGCCTAC 123949
Query 3706 ACCATCGTTGACCGTATCGGCACCCGCATCCTGCGCGACCCGTACACCAACAAACCGTTT 3765
| ||||| |||||||| |||| ||| | || || || || ||||||||||| ||||||
Sbjct 123948 ATGATCGTGGACCGTATTGGCATCCGGACGCTTCGGGATCCCTACACCAACAAGCCGTTT 123889
Query 3766 GTCGGTTTTTATACCACCAAGCGCACCGGGGGTAT 3800
|| || ||||| ||||||| |||||||| || ||
Sbjct 123888 GTTGGGTTTTACGCCACCAAACGCACCGGTGGGAT 123854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 247458825571384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |