Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5108 140 6e-31 seq5102 123 5e-26 seq4712 105 1e-20 seq4558 84.2 4e-14 seq4229 84.2 4e-14 seq5074 78.8 2e-12 seq4763 78.8 2e-12 seq5098 77.0 6e-12 seq3659 75.2 2e-11 >seq5108 Length=183471 Score = 140 bits (154), Expect = 6e-31 Identities = 192/261 (74%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATA 121 ||| | ||| |||||||||| ||||||||||| | ||||||||| | ||| ||||| Sbjct 136222 GCCGGTACTATTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATA 136281 Query 122 CATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC 179 | |||||| ||||| |||| ||| | | ||||| ||| ||||||| || | Sbjct 136282 TTCTGTGCATGGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCA 136340 Query 180 -GCCGTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 | |||||||||||||| ||| ||||| | |||||| | |||||||||| Sbjct 136341 AGAGGTAATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAA 136400 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 |||||||| |||||||||| |||||||| || |||| |||||||||||||| Sbjct 136401 TTCTTGGACCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAA 136460 Query 298 TCAGTGAACGAAAGTTAGGGG 318 ||| |||||||||||||| || Sbjct 136461 TCAATGAACGAAAGTTAGAGG 136481 >seq5102 Length=145960 Score = 123 bits (136), Expect = 5e-26 Identities = 189/261 (72%), Gaps = 9/261 (3%) Strand=Plus/Plus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATA 121 ||| | ||| |||| ||||| ||||||||||| | ||||||||| | ||| ||||| Sbjct 5159 GCCGGTACTATTACCTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCATGAATA 5218 Query 122 CATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC 179 | |||||| ||||| |||| ||| | | ||||| ||| ||||||| || | Sbjct 5219 TTCTGTGCATGGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCA 5277 Query 180 -GCCGTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 | |||||||||||||| ||| ||||| | |||| | | |||||||||| Sbjct 5278 AGAGGTAATGATTAATAGAAGCAGTTTGGGGGCATTAGTAATACGACGCGAGAGGTGAAA 5337 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 |||||||| |||||||||| |||||||| || |||| |||||||||||||| Sbjct 5338 TTCTTGGACCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAA 5397 Query 298 TCAGTGAACGAAAGTTAGGGG 318 ||| ||||||||||||| || Sbjct 5398 TCA-AGAACGAAAGTTAGAGG 5417 >seq4712 Length=8886 Score = 105 bits (116), Expect = 1e-20 Identities = 185/261 (71%), Gaps = 9/261 (3%) Strand=Plus/Plus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATA 121 ||| | ||| |||||||||| |||| |||||| | ||||||||| | ||| || || Sbjct 4281 GCCGGTACTATTACTTTGAACAAATAAGAGTGCTTAAAGCAGGCTTCAAATGCCTGATTA 4340 Query 122 C-ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC 179 || || ||| ||||| |||| ||| | | ||||| ||| |||| || || | Sbjct 4341 TTATGTGCTTGGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGATTTCAGATCA 4399 Query 180 -GCCGTAATGATTAATAGG-GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 | |||||||||||| | | | | ||||| | |||||| | |||| ||||| Sbjct 4400 AGAGGTAATGATTAATGGAAGCAATTTGGGGGAATTAGTATTACGACGCTAGAGCTGAAA 4459 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 |||||||| ||||||| || |||||||| || |||| |||||||||||||| Sbjct 4460 TTCTTGGACCGTCGTAAGACTACCTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAA 4519 Query 298 TCAGTGAACGAAAGTTAGGGG 318 ||| ||||||||||||| || Sbjct 4520 TCA-AGAACGAAAGTTAGAGG 4539 >seq4558 Length=7251 Score = 84.2 bits (92), Expect = 4e-14 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 183 GTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||| ||| ||||| | |||||| | |||||||||||||| Sbjct 6890 GTAATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCT 6949 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||| | |||||||||| |||||||| || |||| ||||||||||| ||||| Sbjct 6950 TGGACCTTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATAAATCA- 7008 Query 302 TGAACGAAAG 311 ||||||||| Sbjct 7009 AGAACGAAAG 7018 >seq4229 Length=5475 Score = 84.2 bits (92), Expect = 4e-14 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 183 GTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||| ||| ||||| | |||||| | |||||||||||||| Sbjct 3139 GTAATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCT 3198 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||| | |||||||||| |||||||| || |||| ||||||||||| ||||| Sbjct 3199 TGGACCTTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATAAATCA- 3257 Query 302 TGAACGAAAG 311 ||||||||| Sbjct 3258 AGAACGAAAG 3267 >seq5074 Length=83228 Score = 78.8 bits (86), Expect = 2e-12 Identities = 97/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 183 GTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||| ||| ||||| | |||||| | |||||||||||||| Sbjct 36578 GTAATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCT 36637 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||| |||||||||| |||||||| || |||| ||||||||||| ||||| Sbjct 36638 TGGACCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATAAATCA- 36696 Query 302 TGAACGAAAG 311 ||||||||| Sbjct 36697 AGAACGAAAG 36706 >seq4763 Length=9537 Score = 78.8 bits (86), Expect = 2e-12 Identities = 97/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 183 GTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||| ||| ||||| | |||||| | |||||||||||||| Sbjct 306 GTAATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCAAGAGGTGAAATTCT 247 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||| |||||||||| |||||||| || |||| ||||||||||| ||||| Sbjct 246 TGGACCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATAAATCA- 188 Query 302 TGAACGAAAG 311 ||||||||| Sbjct 187 AGAACGAAAG 178 >seq5098 Length=128029 Score = 77.0 bits (84), Expect = 6e-12 Identities = 94/126 (75%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 185 AATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||| ||| ||||| | |||||| || |||||||||||||||| Sbjct 44366 AATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGATGCGAGAGGTGAAATTCTTG 44307 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 || |||||||||| |||||||| || |||| ||||||||||| ||||| | Sbjct 44306 GACCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATAAATCA-AG 44248 Query 304 AACGAA 309 |||||| Sbjct 44247 AACGAA 44242 >seq3659 Length=3729 Score = 75.2 bits (82), Expect = 2e-11 Identities = 96/130 (74%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 183 GTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||| ||| ||||| | |||||| | |||||||||||||| Sbjct 2310 GTAATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCT 2251 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||| |||||||||| |||||||| || |||| ||||||||||| ||| | Sbjct 2250 TGGACCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATAAAT-AA 2192 Query 302 TGAACGAAAG 311 ||||||||| Sbjct 2191 AGAACGAAAG 2182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915153105152