Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq5108 78.8 6e-13 seq5102 73.4 2e-11 seq1736 73.4 2e-11 seq5115 71.6 8e-11 >seq5108 Length=183471 Score = 78.8 bits (86), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 81503 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 81446 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 81445 TAAT-CAATGCGAG 81433 >seq5102 Length=145960 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||| |||||||||| Sbjct 6188 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAATGGCAGGGACG 6131 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 6130 TAAT-CAATGCGAG 6118 >seq1736 Length=1359 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||| |||||||||| Sbjct 182 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAATGGCAGGGACG 125 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 124 TAAT-CAATGCGAG 112 >seq5115 Length=242605 Score = 71.6 bits (78), Expect = 8e-11 Identities = 54/61 (89%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||||| ||||||||||| ||||||||| |||||||||||||| ||| || | Sbjct 58820 TTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAATGGCAGGGACGTAAT-CAATGCGA 58763 Query 122 G 122 | Sbjct 58762 G 58762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300785550320