Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5124 495 3e-135 seq5122 435 2e-117 >seq5124 Length=26641161 Score = 495 bits (548), Expect = 3e-135 Identities = 1185/1775 (67%), Gaps = 39/1775 (2%) Strand=Plus/Plus Query 65081 ACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTG 65140 || |||||||| || ||||| ||||| | ||| || | ||||||||||| ||||| || Sbjct 10932369 ACGGTGAACTGAATGGCATTCGCAGCTGGCTTTGTGCGCAGATAGTACATTCCGGTTTTA 10932428 Query 65141 AGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCC 65200 || ||||| ||| | || || || || || | | |||| |||| || ||||| ||| Sbjct 10932429 AGACCAGCTTTCCAGGAGTAAAAGTGTATGGAGGTCAGTTTTCCATAGTTGGGCTCTGCC 10932488 Query 65201 ACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCATGTC 65259 ||||| || || ||||||||||||||||| ||| |||| |||||| || || ||||| | Sbjct 10932489 ACATGAATGTTGAACGACTGACTCTGATCTATG-AACGCACCACGGTCGGCGGCCATTTT 10932547 Query 65260 AATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTG 65318 ||| | ||| | | || || ||||| || ||||||||||| || ||| | Sbjct 10932548 AATCGTG-GACTTAACTGAGATTTCCCACACCGTCTTGTACAGATCGCGAACCCTCTGGG 10932606 Query 65319 GAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACT 65378 | || ||||||||| |||| ||| || | | | || || | || ||| | Sbjct 10932607 GGATGGCCTCAATGTTTTGGATTGAGCCCCTGCTGGATATGATCTGGTTCTTCATGTCGT 10932666 Query 65379 CTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACT 65438 | |||||| ||| || | || | | | ||| ||| | |||| || || |||| Sbjct 10932667 CGTCCCACAAGTCCAGCTCTGTTAGGTCGCGCAACAAATGATGGTTGACCACCTGAAACT 10932726 Query 65439 CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGT 65498 |||||||||| || || | | || ||||| | || ||| || ||||||||| ||| Sbjct 10932727 CGCCGGACAGAACTCGCCTGGTGTATATGTTCGTGGTATAGGGCTCGAAGGATTCATTGT 10932786 Query 65499 TGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCA 65558 |||| | ||||| || ||||||||||| ||||| ||||| |||| || ||||| || | Sbjct 10932787 TGCCCATTATTTGAGCTGTAGATGCAGTGGGCATTGGAGCAACCAGCAGGGAGTTGCGGA 10932846 Query 65559 ATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGA 65618 |||| | | | ||| | || || | ||||| ||| | |||| ||| | Sbjct 10932847 CACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAA--GGTT---CGTTGG 10932901 Query 65619 CATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAAC 65678 | || | |||||| || | |||| |||| | || |||| || | Sbjct 10932902 GA-CCTTGTCCCACATGTCGTACTGCAAAATTCCCTTGCTCACCGGGCTGCCCTCATAGG 10932960 Query 65679 TATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAA 65738 | ||||| || || || ||| |||| |||||||| || | || || | |||| Sbjct 10932961 TTTCGTAAGGGCCTTCGGTCTGGGCCAGTTCACAGCTGGCTTCCAAGGCTCCATAGTAAA 10933020 Query 65739 TGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCA 65798 |||| ||||| || | |||| | || || || || || || ||||| | | || Sbjct 10933021 TGGTTTCGAATATCTGCTGATTCAACAGACCGGCTTCTTCACTTTCATACGGGAATCGCA 10933080 Query 65799 TCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAAT 65858 | || | || | ||| || | || |||| || || || | |||||| || | ||||| Sbjct 10933081 TGAGAATCAAGGCGTCAGCGAATCCCTGAATACCTATGCCCACGGGACGGTGCCTCAAAT 10933140 Query 65859 TGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGC 65918 | || || ||||| || | || || || |||||||| || || || | ||| | Sbjct 10933141 TTGACTTCCTTGCCTCTGGCAAGGGATAATAGTTGATATCAATTATCTTGTTTAGATTTC 10933200 Query 65919 GTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCG 65977 || || | | || | | | | || || ||||||| | || || Sbjct 10933201 TGGTAACTATCTTGGTGACTTCCTTGAGCTTCTT-GAAATCATACGTCTTC------TCC 10933253 Query 65978 GGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATC 66037 || ||| |||||| || ||||||| ||||| | |||||||||||||||| Sbjct 10933254 GGTGTG---------ACAAACATGTTGAGGGCAATGGATGCCAAGTTGCAGACAGCTATC 10933304 Query 66038 TCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCC 66097 || || || |||| || || || ||||| ||||||| || ||||| |||||||| Sbjct 10933305 TCATCCGGCGCGGAGTATTCAACGATTTCCGTGCACAAGTTGCTGCACTTGATGGTGCCA 10933364 Query 66098 AAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCG 66157 | |||||| || || ||||| | ||||| || |||||| | | |||||||||| | || Sbjct 10933365 ACATTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGAAGAGCATGTACGGATTTCCA 10933424 Query 66158 GTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACC 66217 || || ||||| | |||||||||||| | ||| || | | ||||| ||||| || Sbjct 10933425 GTTTCCACTTGCGCCTCAATGATGGCATACCACAGGGATTGAGCCTTAACCGTTCGGTTG 10933484 Query 66218 GCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCG 66277 || | ||| | | ||||| | || || || | |||||| || ||||| || || Sbjct 10933485 GCTCGACCCTCTTGCTCGTATTTCTCATACAGCTTTTCGAATTCATCGCCCCACACATCT 10933544 Query 66278 GACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGA 66337 || | || || ||||| || ||||| |||||||||||||| | || || |||| Sbjct 10933545 TGGAGGCCAGGGCATTTGTGGGGGCACATGAGCGACCAATCACCGT--TGGCCTCCACG- 10933601 Query 66338 CG---CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCC 66394 || ||| || ||||| |||||||| || ||||| || |||||||| || || | ||| Sbjct 10933602 CGCTTCATGAAGAGATCGGGTATCCACAGAGCGTAAAACAGATCGCGGGCGCGATTCTCT 10933661 Query 66395 TCAATG-CCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTC 66453 || || ||||| ||||| | |||||||||||||||| || | ||||| || || Sbjct 10933662 TCCTTGCCCGTG-TTTTTCTTTAGTTCGAGGAACTCAAAGACATCCGAGTGCCAGGGCTC 10933720 Query 66454 CAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGAC 66513 |||||| ||||| || | || ||| |||||||| || ||||| || || || || || Sbjct 10933721 CAGGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCTCCCTGGTCCACATAACGCGCCAC 10933780 Query 66514 ATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGAT 66573 |||||||||||| | | ||| || || | ||| || || | || || |||||| || Sbjct 10933781 ATTGTTGAAGACCCTGAGCATGGGAACCAACCCATTGGACGTTCCGTTTGTGCCGCAAAT 10933840 Query 66574 GGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGA 66633 | || || ||| || || || || || || ||||| ||||| || | ||| || Sbjct 10933841 CGAGGTGCCCTTTGCACGAATGCAATGCACGTTGAGTCCAATGCCACCAGCAGACTTGGA 10933900 Query 66634 GATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGT 66693 ||| || || | |||| | | || ||||| || || ||||| | | ||||| Sbjct 10933901 GATCATGGCGCACTGCTCCACAGACTTAAAAATGCCCTCGATTGAGTCGGCAGTCATGGT 10933960 Query 66694 CAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGT 66753 ||| ||| | || || || || || | |||||| || | || || ||||| | Sbjct 10933961 CAGAAGGAAACACGACGACAGCTGCGGGCGGTTTGTGGCAGCAGCAAACAGCGTGGGCGA 10934020 Query 66754 AGCGTGCGTAAAGTAATG--GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATG 66811 || ||||||||||| | ||| | | | |||||| || || | | | ||||| || Sbjct 10934021 TGCATGCGTAAAGTAGCGCTCCGATAGAAG--ATTGTAGGTTTCCACGGCCGCATCTATA 10934078 Query 66812 TTTTCGCCATGAATCCCGAGTGCACATCGCATCAG 66846 | || ||||| || |||| || |||||||| Sbjct 10934079 TCCTCTCCATGGATTCCGATCGCCACGCGCATCAG 10934113 >seq5122 Length=22589142 Score = 435 bits (482), Expect = 2e-117 Identities = 584/810 (72%), Gaps = 7/810 (1%) Strand=Plus/Plus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| ||||| || |||||||| || |||||||| ||||||||||| ||| | | ||||| Sbjct 17925144 AGGCTGAAGCCTCTTTCTGGACCGTCGAGGAGGTGGATTTGTCCAAGGACCTTACTGACT 17925203 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 || | || | | || || | |||||||| || ||| |||| ||||| |||| Sbjct 17925204 GGCACCGACTGAAGGACGACGAGCGCCATTTCATCTCGCACGTGCTGGCTTTCTTCGCCG 17925263 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 | || || || ||||| || |||||| | |||| || ||| ||||||||||| || Sbjct 17925264 CCTCCGATGGCATCGTAAACGAGAATCTGGTGGAGCGCTTCAGTCAGGAGGTGCAGGTCA 17925323 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 ||||||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct 17925324 CGGAGGCACGCTGCTTCTACGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 17925383 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 ||||||| || ||||| || |||||| |||| | | | || || ||||||| | Sbjct 17925384 ACAGTGTGCTGATCGACACTTACATCCGGGATCCGAACCAGCGCGAGTACCTGTTCAACG 17925443 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465 | ||||| ||||| ||||| || ||||| || || || |||||| | |||||| || Sbjct 17925444 CTATCGAAACGATGCCGGCTGTAAAGCGCAAGGCAGACTGGGCCCTGTCCTGGATCTCC- 17925502 Query 61466 GTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 | ||| | || | || || || || | | || ||||| | || ||||| | || Sbjct 17925503 -TCCAAGTCTGCCAATTTCGGGGAGCGTATCATCGCCTTTGCCGCCGTGGAGGGCATCTT 17925561 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 ||||| || ||||| | || || ||| | ||||| || || || ||||| || || Sbjct 17925562 CTTCAGCGGCAGCTTTGCATCCATTTTCTGGCTTAAGAAGCGCGGTCTAATGCCTGGACT 17925621 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTT 61643 ||||||| ||| ||| | || || |||||||||||| |||| || || ||||| || | Sbjct 17925622 GACCTTCTCCAACGAGCTTATCTCTCGCGACGAGGGCTTGCACTGCGACTTTGCCGTGCT 17925681 Query 61644 GCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCG 61703 | | ||| | | | |||||| | || || | | ||||| | ||||| | || Sbjct 17925682 GATGTTCCAGC---ACCTGGTGCAGCGACCCAAGCACGAGCGCATCATCGAGATCATCCG 17925738 Query 61704 TGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGG 61763 ||| ||||| | || || ||||| || || || || || ||||||| | ||||| Sbjct 17925739 TGACGCGGTGGCGATTGAGCAGGAGTTCCTCACCGATGCCCTGCCCGTTAATTTAATCGG 17925798 Query 61764 CATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGA 61823 ||||||||||| || ||||| ||||| || || || ||||| |||||| || | || || Sbjct 17925799 CATGAATTGTGACCTGATGTCCCAGTACATAGAGTTCGTTGCGGACCGTTTGCTTGTGGA 17925858 Query 61824 TTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTC 61883 ||||| | | |||||| || || || ||||| || | |||||||| ||||| || Sbjct 17925859 GTTGGGCGTTGGGAAGATCTACAACACCAAGAACCCCTTCAACTTCATGGAGATGATCTC 17925918 Query 61884 GCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||||||| ||||| || ||||| ||||| Sbjct 17925919 GCTGGATGGAAAGACCAACTTTTTTGAGAA 17925948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397543172375360