Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq5124 96.9 1e-14 >seq5124 Length=26641161 Score = 96.9 bits (106), Expect = 1e-14 Identities = 183/269 (68%), Gaps = 8/269 (3%) Strand=Plus/Plus Query 21633 ACACCCGTGGAGCCATATCCTCCCTCGCCGCGCTTGGTCTCGCCGAGCTCGCCCTTTTGC 21692 || || ||||| || |||| |||||||||||| ||| || | |||| | || | Sbjct 14434234 ACTCCGGTGGAACCGAATCCCGCCTCGCCGCGCTCGGTGTCCTCCAGCTTGTCCACCATC 14434293 Query 21693 GCCTGCTGCAAAACTGGGGTCG-AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCC 21751 || | ||| || | | ||||||| || |||| ||||||||||| ||||| Sbjct 14434294 ACCAGTTGC-------GGATAGAAGATGCGCTCGCAAATGAACTGGGCGATGCGGTCGCC 14434346 Query 21752 ATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCT 21811 ||||| | || || || | |||||| ||||| || || || |||| ||||| | Sbjct 14434347 GTGCTTCACCTCGAAATCTACATTAGAGTGATTGAACAGGACGACGCCGAGATTGCCGCG 14434406 Query 21812 ATAAGAACTGTCGACGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGA 21871 |||| ||| || || |||||||| || |||| |||||||| |||||| || || Sbjct 14434407 ATAATCCTCGTCCACCACACCGGCGCCCACATCGATGAAGTTCTTCACGGCCAGCCCGGA 14434466 Query 21872 TCTGGGAGCGACGCGGCCGTAGTGGCCCT 21900 | || || || || |||||| ||||| Sbjct 14434467 CCGAGGGGCCACCCGTCCGTAGGAGCCCT 14434495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084598996076952