Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20erecta_20[refseq_20GCF_5F000005135.1_202006-07-12] 5,124 sequences; 152,712,140 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq5120 89.7 2e-12 >seq5120 Length=17746568 Score = 89.7 bits (98), Expect = 2e-12 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 |||||| |||||||||||||| || | | ||||||| |||||||| || || ||| ||| Sbjct 9503746 ACCAATTGTCATACGAGAGGGGATAGCGTGAGGGTTAATGATGATATCGGGTGCCAAGCC 9503687 Query 364483 GTCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCG 364541 || ||| |||| |||||| || || || || || || |||||||||||| Sbjct 9503686 CTCGCAGGTGAAGGCCATATCCTCTTGGCGGTAC-TGGATTCCGCACGTTCCCTTTTGCC 9503628 Query 364542 CATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | | |||||||| ||||| ||||| || Sbjct 9503627 CGTGACGAGAAGCGAACTTATCGCCGAT 9503600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884762654851732