Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1655 192 1e-46 seq1620 159 7e-37 >seq1655 Length=5713 Score = 192 bits (212), Expect = 1e-46 Identities = 245/332 (74%), Gaps = 9/332 (3%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||||||||| |||| ||| |||||||||| ||||||||| Sbjct 4525 CCCGACGAGGGGAGTGAAATAGACC-TGAAACCGAATGCCTACAAGCAGTCGGAGCCTCT 4467 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || |||| || Sbjct 4466 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCAAG 4409 Query 124 GTTAAGGGCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTT 182 ||||| | || || ||| || || ||||||||| || || |||||| | |||| Sbjct 4408 CTTAAG-----CCGGTAGGTGTAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGTCTAGTT 4354 Query 183 GGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACG 242 | |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| Sbjct 4353 GCTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACA 4294 Query 243 CGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGG 302 || |||||| |||||| |||||||| | ||||| | || |||||| Sbjct 4293 CGCACTGGAGGGCCGAACTCACGCCTGTTGAAAAAGTCGGAGATGAGCTGTGGCTAGGGG 4234 Query 303 TGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||| |||||||||| || Sbjct 4233 TGAAAGGCCAATCAAACTCGGAAATAGCTGGT 4202 >seq1620 Length=11727 Score = 159 bits (176), Expect = 7e-37 Identities = 234/325 (72%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| ||||||||| |||| | || | |||||||||| || ||||| | | | | Sbjct 10982 AGGGGAGTGAAATAGTTCCTGCAACCATGTGCCTACAAGCAGTTAGAGCCCATTTAAG-G 10924 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | ||||| || ||||||| | || | || |||||||| Sbjct 10923 GTGATAGCGTGCCTCTTGTAGAATGAACCGGCGAGTTA-TAGTTGCATGCAAGGTTAAG- 10866 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGA-GTTGGTGGCG 189 || | || |||||||| ||||||||| || || |||||| || || || || Sbjct 10865 -CTGAAAAAGCGG-AGCCGAAGCGAAAGCGAGTCTGAATAGGGCGTTGAAGTATGTTGCC 10808 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||| ||| | |||| |||| ||||||| || | Sbjct 10807 ATAGACCCGAAACCAGGTGATCTATCCATGTCCAGGATGAAAGTGCGGTAATACGCACCG 10748 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| ||||||| || |||||||||||| | |||||| | || ||| ||||||| Sbjct 10747 GAGGTCCGAACCCGTGTACGTTGAAAAGTGCTGGGATGAGGTGTGGATAGCGGTGAAATT 10688 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 |||| | |||| ||| |||||| || Sbjct 10687 CCAAACGAACTTGGAGATAGCTGGT 10663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972751885312