Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3394 152 8e-35 seq3403 147 3e-33 seq1144 93.3 6e-17 >seq3394 Length=1798 Score = 152 bits (168), Expect = 8e-35 Identities = 179/230 (78%), Gaps = 14/230 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 429 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 486 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 487 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 543 Query 119 T--ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCG 175 | |||||||||| |||| | ||| ||| || ||||| ||| | || ||||||||||| Sbjct 544 TTTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCG 600 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||| |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 601 TGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 649 >seq3403 Length=1238 Score = 147 bits (162), Expect = 3e-33 Identities = 178/229 (78%), Gaps = 14/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 707 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 650 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 649 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 593 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 592 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 536 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || ||| || |||||||||||||||||||||||||||||| ||||| || Sbjct 535 GCAGCC-AGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 489 >seq1144 Length=1006 Score = 93.3 bits (102), Expect = 6e-17 Identities = 71/80 (89%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 147 ACTCGTTGAATACAT-CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 205 || |||||| ||| | || |||||||||||||| |||||| ||||||||||||||||||| Sbjct 990 ACACGTTGA-TACTTTCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAG 932 Query 206 ACCTGTTATTGCCTCAAACT 225 ||||||||||| ||||| || Sbjct 931 ACCTGTTATTG-CTCAATCT 913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751963968390