Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3412 127 4e-27 seq3394 127 4e-27 seq1171 127 4e-27 seq1144 127 4e-27 seq1005 127 4e-27 seq1088 93.3 8e-17 >seq3412 Length=1072 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 816 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 875 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 876 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 934 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 935 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 994 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 995 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 1053 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 1054 AAAGTTAGAGG 1064 >seq3394 Length=1798 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 1398 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 1339 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 1338 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 1280 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 1279 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 1220 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 1219 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 1161 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 1160 AAAGTTAGAGG 1150 >seq1171 Length=1177 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 860 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 919 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 920 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 978 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 979 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 1038 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 1039 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 1097 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 1098 AAAGTTAGAGG 1108 >seq1144 Length=1006 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 147 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 206 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 207 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 265 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 266 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 325 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 326 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 384 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 385 AAAGTTAGAGG 395 >seq1005 Length=1057 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 605 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 664 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 665 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 723 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 724 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 783 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 784 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 842 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 843 AAAGTTAGAGG 853 >seq1088 Length=1215 Score = 93.3 bits (102), Expect = 8e-17 Identities = 180/251 (72%), Gaps = 15/251 (6%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT---TTGCTCGAATA-CATTAGCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 649 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 590 Query 131 GGAATAATAGAATAGGACGTGCGGTTCT-ATTTTGTTGGTTTCTAGGAC-CGCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 589 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 531 Query 189 ATTAATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| || | ||||| | |||||| | ||||||||||| |||| Sbjct 530 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAAT--CTGGACC 473 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 ||||||||||| |||||||| || |||| |||| ||||| |||||| ||||| Sbjct 472 GTCGTAAGACTAACTA-AGCGAAAGCATT-GCCAAAGATG-TTTCA-TAATCA-AGAACG 418 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 417 AAAGTTAGAGG 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915154734208