Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4608 120 1e-24 seq3133 120 1e-24 seq989 120 1e-24 seq4564 102 3e-19 seq973 95.1 5e-17 seq632 82.4 3e-13 >seq4608 Length=12950 Score = 120 bits (132), Expect = 1e-24 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| |||| |||||| | | |||||| |||||| Sbjct 12835 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAAACTAAAT 12776 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||| ||||||| |||| ||||| ||||||| ||| || | Sbjct 12775 ATAACCATGAGACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAAT 12716 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 ||||||||||| || |||||||| || | | ||| Sbjct 12715 AGAGAGTTAAATAGTACGTGAAACTGCTTAGAGG 12682 >seq3133 Length=1069 Score = 120 bits (132), Expect = 1e-24 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || || |||||||||||||||||||||| | ||| || ||||| ||| | Sbjct 788 GAGCATATATGCTGTGACCCGAAAGATGGTGAACTATACTTGATCAGCTTGAAGTCAGGG 729 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||| | || | | |||||| ||||||||||||| |||| | ||| ||| Sbjct 728 GAAACCCTGATGGAAGACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTA 669 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 668 TAGGGGCGA 660 >seq989 Length=1204 Score = 120 bits (132), Expect = 1e-24 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || || |||||||||||||||||||||| | ||| ||| ||||| ||| | Sbjct 564 GAGCATATATGCTGTGACCCGAAAGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGG 505 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||| | || | | |||||| || |||||||||| |||| | ||| ||| Sbjct 504 GAAACCCTGATGGAAGACCGAAACAGTTCTGACGCGCAAATCGATTGTCAGAATTGAGTA 445 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 444 TAGGGGCGA 436 >seq4564 Length=1015545 Score = 102 bits (112), Expect = 3e-19 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||| ||| | |||||| |||| |||| |||||| | | |||||| |||||| Sbjct 4602 GAGTCGTTTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAAACTAAAT 4661 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||| ||||||| |||| ||||| ||||||| ||| || | Sbjct 4662 ATAACCATGAGACCGATAGTAAACAAGTACCGTGAGAGAAAGTTGAAAAGAACTCTGAAT 4721 Query 160 AGAGAGTTAAA 170 ||||||||||| Sbjct 4722 AGAGAGTTAAA 4732 >seq973 Length=1006 Score = 95.1 bits (104), Expect = 5e-17 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 582 GGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGT 641 |||||||||| | ||| ||| ||||| ||| |||||| ||| |||| | || | | || Sbjct 492 GGTGAACTATACTTGATCAGGTTGAAGTCAGGGGAAACCCTGATGGAAGACCGAAACAGT 433 Query 642 TCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||||||||||| |||| | ||| |||||||||||| Sbjct 432 TCTGACGTGCAAATCGATTGTCAGAATTGAGTATAGGGGCGA 391 >seq632 Length=4389 Score = 82.4 bits (90), Expect = 3e-13 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| ||| |||| |||||| | | |||||| |||||| Sbjct 3689 GAGTCGTGTTGCTTGATAGTGCAGCATTAAGTGGGTGGTAAACTCCATCTAAAACTAAAT 3630 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149 || | ||||||||||| ||||||| |||| ||||| ||||||| Sbjct 3629 ATAACCATGAGACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAG 3580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079893908300