Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1655 147 3e-33 seq1620 107 3e-21 >seq1655 Length=5713 Score = 147 bits (162), Expect = 3e-33 Identities = 182/248 (73%), Gaps = 11/248 (4%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| |||| || ||||||| Sbjct 3273 CTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTA-CGACTTCGCAG 3331 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| ||| ||| | || Sbjct 3332 AGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGTCTGTGCCACC--------CGCA 3383 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || | ||| || || | || |||||||||||| | | |||||| | Sbjct 3384 AATGGTTGCCCAC--TCACGGGTCTCGTTTATCCCGAAGTTACACGAGTAATTTGCCTAG 3441 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||| | || |||| | | | |||||| |||||||||||| | |||||||||||||| Sbjct 3442 TTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCTGTGTCGGT 3501 Query 241 TTACGGTA 248 || |||| Sbjct 3502 TTCGGGTA 3509 >seq1620 Length=11727 Score = 107 bits (118), Expect = 3e-21 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 ||||||||||| |||||||||||||| ||||||||||| ||||||||| | ||||| | | Sbjct 9765 GCACCCCTTCTTCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCTCTC 9824 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | ||| || || |||| | || |||||||||||||| ||||| Sbjct 9825 GCTCACCTGAGGATACTCTCCTCAACTACCTGTGTCGGTTTGCGGTA 9871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694366728258