Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1620 102 9e-20 seq1655 82.4 8e-14 >seq1620 Length=11727 Score = 102 bits (112), Expect = 9e-20 Identities = 124/166 (75%), Gaps = 5/166 (3%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| ||||| | | || ||| || ||| | ||| ||| || || || Sbjct 9868 CGCAAACCGACACAGGTAGTTGAGGAGAGTATCCTCAGGTGAGCGAGAGAACTCTCG-TT 9810 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||| |||||| |||||| |||||||||| | || |||| | || || || Sbjct 9809 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGAAGAAGGGGTGCTGTCC---TAACGGA 9753 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186 | ||||| ||| ||| |||| | |||||||| |||||||||||| Sbjct 9752 CAGCCGCAGTGAAGAGGCCCAGACGACTGTTTATCAAAAACACAGG 9707 >seq1655 Length=5713 Score = 82.4 bits (90), Expect = 8e-14 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 3503 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 3444 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAA 119 ||||||||||| | | ||||||||||||||||| Sbjct 3443 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAA 3409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531174547884