Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1655 325 1e-86 seq1649 84.2 6e-14 >seq1655 Length=5713 Score = 325 bits (360), Expect = 1e-86 Identities = 321/419 (77%), Gaps = 23/419 (5%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||||||| | |||||||||| | || ||||||||| ||||| | | |||||||||| Sbjct 3089 CGCGGATACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGCCGATGCTGGAGACAGC 3148 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3149 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 3208 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| ||||||||||||||||||||||||||| || || ||| Sbjct 3209 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAGTGCT-------- 3260 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 || || || | |||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 3261 -CTCACACCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTT 3319 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || || |||||| ||||||||||| ||||||||||| | |||||| | | | ||| Sbjct 3320 ACGACTTCGCAGAGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGTCTGTGCCACC 3379 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360 ||| || | | | ||||| || || |||||||||||| Sbjct 3380 CGCA--------------AATGGTTGCCCACTCACGGGTCTCGTTTATCCCGAAGTTACA 3425 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 |||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 3426 CGAGTAATTTGCCTAGTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACC 3484 >seq1649 Length=1104 Score = 84.2 bits (92), Expect = 6e-14 Identities = 107/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||||||||||||||||||| | |||||||||||| || | | || |||| Sbjct 578 TACACTGCATCTTCACAGCAAATTCAATTTCACTAAGCTTATTCTTGATACAGTTGTTAT 519 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||| |||||| | | | ||| | | |||||||||||||||| ||| || Sbjct 518 GTCGTTACTCCATTCATGCAGGGCCGTATTTAGCGGTCAAGGAATTTCGCTACATTATGA 459 Query 127 CCGTTATTGTTACGGCCGCCGTTTAC 152 | | | | || |||||| ||||| Sbjct 458 CTCTCAGT-ATAAAGCCGCCATTTAC 434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260737640832