Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1655 295 1e-77 seq1620 150 4e-34 seq1649 77.0 7e-12 >seq1655 Length=5713 Score = 295 bits (326), Expect = 1e-77 Identities = 229/274 (84%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||||||| |||| | ||||||| | ||| | || | ||||||| | || Sbjct 3095 TACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGCCGATGCTGGAGACAGCGGGGAA 3154 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 3155 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 3214 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| | ||| | |||||| || Sbjct 3215 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTC---------AGTGCTCTCAC 3265 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | ||| ||||||||||| |||||||||||||||||| ||||||| ||||||| ||||| Sbjct 3266 ACCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTACGACT 3325 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 | ||||| ||||||||||| |||||||||||| Sbjct 3326 TCGCAGAGCCCTGTGTTTTTACTAAACAGTCGCT 3359 >seq1620 Length=11727 Score = 150 bits (166), Expect = 4e-34 Identities = 118/136 (87%), Gaps = 5/136 (4%) Strand=Plus/Plus Query 232 CTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG 291 ||| ||| || ||||||||||||||||||| |||||||||| ||||||| ||| ||||| Sbjct 9689 CTTACGATTTTGCAGAAACCTGTGTTTTTGATAAACAGTCGTCTGGGCCTCTTCACTGCG 9748 Query 292 GCCTGTCA--TAG-ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 || |||| ||| |||| |||||||||| || ||||||||||||||||||||||||||| Sbjct 9749 GC-TGTCCGTTAGGACAG-CACCCCTTCTTCCGAAGTTACGGGGTCATTTTGCCGAGTTC 9806 Query 349 CTTAACAATAGTTCTC 364 |||||| | ||||||| Sbjct 9807 CTTAACGAGAGTTCTC 9822 >seq1649 Length=1104 Score = 77.0 bits (84), Expect = 7e-12 Identities = 107/148 (72%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | | | ||||||||| || |||| |||| ||||| | Sbjct 578 TACACTGCATCTTCACAGCAAATTCAATTTCACTAAGCTTATTCTTGATACAGTTGTTAT 519 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||| ||| || | | | ||| | | |||||||||||||||| ||| || Sbjct 518 GTCGTTACTCCATTCATGCAGGGCCGTATTTAGCGGTCAAGGAATTTCGCTACATTATGA 459 Query 121 CCGTTA-TAGTTACGGCCGCCGTTTACT 147 | | | || || |||||| |||||| Sbjct 458 CTCTCAGTA--TAAAGCCGCCATTTACT 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062347453696