Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1620 257 3e-66 seq1655 163 6e-38 >seq1620 Length=11727 Score = 257 bits (284), Expect = 3e-66 Identities = 193/227 (85%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 8841 GACAGTGTCTGGTTGGCAGTTTGACTGGGGCGGTCGCCTCCCAAATAGTAACGGAGGCGC 8782 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 |||||| | ||||||| ||| |||||| ||| | | |||| ||||||| ||||| | | Sbjct 8781 CCAAAGGTTCCCTCAGAATGGTTGGAAATCATTCATAGAGTGTAAAGGCAGAAGGGAGCT 8722 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||||| || || ||| ||||||||||||||||||||||| |||||||| ||| | Sbjct 8721 TGACTGCGAGACATACAGGTCGAGCAGGGACGAAAGTCGGGCTTAGTGATCCGGTGGTAC 8662 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| |||| |||||| ||||||||||||||||||||||||| Sbjct 8661 CATATGGAAGGGCCATCGCTCAACGGATAAAAGCTACCCTGGGGATA 8615 >seq1655 Length=5713 Score = 163 bits (180), Expect = 6e-38 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169 |||||| ||| | ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2916 CGGGACCCTGTATGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGG 2857 Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229 ||| | | | | ||||| || ||||||| | ||||||| |||| ||| Sbjct 2856 CGCGCGATGGTGGGCTCAGGCCGGTCGGAAACCGGCTGTTGAGTGCAATGGCATAAGCCC 2797 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | ||||||||| | || || ||||| |||||||||||| | || |||||||| || Sbjct 2796 GCCTGACTGCGAGAGTGACAGCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGG 2737 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | | | ||||| |||| |||||| ||||||||||| ||| || |||||| Sbjct 2736 TCCCGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTAGGGATA 2687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982351410496