Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq1655 122 6e-26 seq1620 102 6e-20 >seq1655 Length=5713 Score = 122 bits (134), Expect = 6e-26 Identities = 112/139 (81%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||| | |||||||||||||||| || Sbjct 2698 TACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGA 2757 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| ||||||| || ||| |||||||| ||| || ||| |||||||||||| | Sbjct 2758 CTTTCGTCTCTGCTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCA 2817 Query 120 TCACTACGATTTCCGACCG 138 || || |||||||||| Sbjct 2818 ACA-GCCGGTTTCCGACCG 2835 >seq1620 Length=11727 Score = 102 bits (112), Expect = 6e-20 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCAT-TCATAGCCACCGGATCACTATGACCT 59 || |||||||||||||||||||||||||||||| | || |||||||||||||| | || Sbjct 8626 TAGCTTTTATCCGTTGAGCGATGGCCCTTCCATATGGTA-CCACCGGATCACTAAGCCCG 8684 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTA 119 |||||| |||||| | ||| ||||||| |||||| | ||| |||| || |||| Sbjct 8685 ACTTTCGTCCCTGCTCGACCTGTATGTCTCGCAGTCAAGCTCCCTTCTGCCTTTACACTC 8744 Query 120 TCACTACGATTTCCGACC 137 | | ||||||| ||| Sbjct 8745 TATGAATGATTTCCAACC 8762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351983678200