Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq1655 147 2e-33 seq1620 102 8e-20 >seq1655 Length=5713 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 2710 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 2769 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 2770 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 2829 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 2830 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 2865 >seq1620 Length=11727 Score = 102 bits (112), Expect = 8e-20 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | ||||||||||||||| | || |||||| |||| Sbjct 8638 GTTGAGCGATGGCCCTTCCATATGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 8697 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| | || |||||||||||||| ||| |||| || |||| | ||| || Sbjct 8698 CTCGACCTGTATGTCTCGCAGTCAAGCTCCCTTCTGCCTTTACACTCTATGAATGATTTC 8757 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 8758 CAACCATTCTGAGGGAACCTTTGGGCGCCTCCGTTA 8793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473577307752