Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1620 343 2e-92 seq1655 306 6e-81 >seq1620 Length=11727 Score = 343 bits (380), Expect = 2e-92 Identities = 241/275 (88%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 1 CGAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCA 60 ||||| | | ||| ||||||||| |||||| ||||| | |||| || ||||| |||| Sbjct 8290 CGAGGCGAGTTTCACACTTAGATGCTTTCAGCGTTTATCTCGTCCATACATAGCTACCCA 8349 Query 61 GCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 ||| ||| | |||| | |||||||| |||||| ||| |||||||||||||||||||||| Sbjct 8350 GCTGTGCGCCTGGCGGCGCAACTGGTACACCAGCGGTATGTCCATCCCGGTCCTCTCGTA 8409 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 8410 CTAGGGATAGCTCCTCTCAAATTTCCTGCGCCCGCGACGGATAGGGACCGAACTGTCTCA 8469 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 8470 CGACGTTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 8529 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | ||| ||||||||||||| || |||||||||||| Sbjct 8530 CAACTACAGCCCCAGGATGCGATGAGCCGACATCG 8564 >seq1655 Length=5713 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| ||||||| |||| |||||||| ||| | Sbjct 2363 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCACACTTAGCTACCCGG 2422 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 2423 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 2482 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||||| ||| || ||||| | |||||||||||||||||||| | Sbjct 2483 TAGGGACAAATCCTCTCAAATCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 2542 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 2543 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 2602 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 2603 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 2636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780762588456