Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq3202 114 2e-23 seq1774 95.1 2e-17 >seq3202 Length=11836 Score = 114 bits (126), Expect = 2e-23 Identities = 158/216 (73%), Gaps = 9/216 (4%) Strand=Plus/Plus Query 78 CTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCG 137 ||||||| ||||| | || |||||||| || | ||||||||||| || || | | Sbjct 4885 CTATCCATTTTGAGCGCTGCGAGGAAGGCG-CTCTGCGGAATTTCCACCTTCCCGAACTG 4943 Query 138 CTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTC 197 | |||||| |||||||| | || ||||| || ||||| |||||||||||| | ||| Sbjct 4944 CCGCATGCGCTTTTTACCCTCTTTCTGCTTTTCCAGCAGTTTGCGCTTACGGGAGATGTC 5003 Query 198 ACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGA-GGTC---CGCG 253 |||||| || ||||||||| || | ||| |||||| || || |||| |||| Sbjct 5004 ACCGCCATAACATTTGGCCGTCACATCCTT--CGAGAGC--GCACCGATGGTCTCACGCG 5059 Query 254 CAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGA 289 |||| | || | ||||||||| ||||| || |||| Sbjct 5060 CAATCACCTTGCTGCCAATGGCCGCCTGAATGGCGA 5095 >seq1774 Length=1228 Score = 95.1 bits (104), Expect = 2e-17 Identities = 137/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 ||||||||||| ||| | || |||||||| || || | || |||||| || ||||| Sbjct 930 GCAAGGAAGGCG-CTTTGCGGGATTTCCACCTTACCAAACTGCCGCATGCGCTTCTTACC 988 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 | || ||||| |||||||| |||||||||||| | |||||||| || ||||| || Sbjct 989 TTCTTTCTGCTTTTCAAGCAGTTTGCGCTTACGGGAAATATCACCGCCATAACATTTAGC 1048 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGC 275 | || | ||| || ||| || || |||||||| | || | |||||| || Sbjct 1049 CGTCACATCTTTTGACAGCGCCCCGATGGTTTCACGCGCAATCACCTTGCTGCCAATAGC 1108 Query 276 GGCCTGGATCGC 287 |||||| | ||| Sbjct 1109 GGCCTGAACCGC 1120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838358532736