Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3394 156 8e-36 seq3403 154 3e-35 seq1144 95.1 2e-17 >seq3394 Length=1798 Score = 156 bits (172), Expect = 8e-36 Identities = 172/224 (77%), Gaps = 5/224 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 649 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTAC 591 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGT-AATCTTGTTAAAC 224 | ||| || ||||| || || ||| | ||| ||||| |||| || | | || | Sbjct 590 AATGAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAAAACCGCTGAACC 533 Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 || || |||| ||||| | | | || || | || | | | ||| ||||| || ||||| Sbjct 532 ACTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CACATGAACTTGGAATTCCCAGTAA 474 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | | ||||| | | ||| |||||||||||||||||||||||| Sbjct 473 GTGTGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGTA 430 >seq3403 Length=1238 Score = 154 bits (170), Expect = 3e-35 Identities = 171/223 (77%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| |||| | ||||||||||||| Sbjct 489 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGG-CTGCACGCGCGCTAC 546 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | ||| || ||||| || || ||| | ||| ||||| |||||| | | || | Sbjct 547 AATGAAAGTATCAACGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAAACCGCTGAACCA 604 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || || |||| ||||| | | | || || | || | | | ||| ||||| || |||||| Sbjct 605 CTTTCATGCTTGGGATTGTGAACTGAAACTGTT-CACATGAACTTGGAATTCCCAGTAAG 663 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||| | | ||| |||||||||||||||||||||||| Sbjct 664 TGTGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGTA 706 >seq1144 Length=1006 Score = 95.1 bits (104), Expect = 2e-17 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 913 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTAC 971 Query 166 ACTGACAGAGCCAACGAGT 184 | ||| || ||||| || Sbjct 972 AATGAAAGTATCAACGTGT 990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947153151488