Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1655 358 2e-96 seq1620 268 3e-69 >seq1655 Length=5713 Score = 358 bits (396), Expect = 2e-96 Identities = 369/478 (77%), Gaps = 5/478 (1%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| | ||| ||||| | |||||||||||| ||||||||| |||| Sbjct 4377 CGAGTCTGAATAGGGCGTCTAGTTGCTGGCAGAAGACCCGAAACCGAGTGATCTAGCCAT 4318 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 ||||||| ||||||||||||||||||| ||||||| |||||| ||| |||||||||| Sbjct 4317 GGCCAGGCTGAAGGTGCGGTAACACGCACTGGAGGGCCGAACTCACGCCTGTTGAAAAAG 4258 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 | || |||||||||||| |||||||||||||| || |||||| ||||||||||||||||| Sbjct 4257 TCGGAGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTGGTTCTC 4198 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTA-TCACCATCGGGGGTAGAGCACTGTTATG 239 ||||| ||||| |||||| | ||| ||| | ||| ||||||||||||||| | Sbjct 4197 CGCGAAATCTATTGAGGTAGACCGTCAGGTATTTACCCCGGGGGGTAGAGCACTGGATGG 4138 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||||||||| | | ||||||||||| |||||||||||| | | ||| ||| Sbjct 4137 GCTAGGGGGGCCCAAAGCCTTACCAAACCTAACCAAACTCCGAATACCCGGAAGTATTAG 4078 Query 300 CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTAT 359 | || || || ||||||||||||||| | ||||||| || | || ||| | Sbjct 4077 CCTGGCAGACAGACAGTGGGTGCTAAGGTCCATTGTCGAGAGGGAAACAGCCCAGACCAC 4018 Query 360 CAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGC 419 ||||||||||||| |||| ||||||| | || || || | | | || ||| | Sbjct 4017 CAGCTAAGGCCCCTAAATCGTGGCTAAGTGGGA--AAGGATGTGGGGATTCCAAAACAAC 3960 Query 420 TAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 |||| |||||||| |||||||||| || |||||||| |||||| |||||||| ||| Sbjct 3959 CAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAATAGCTCACTGGTC 3903 >seq1620 Length=11727 Score = 268 bits (296), Expect = 3e-69 Identities = 339/454 (75%), Gaps = 14/454 (3%) Strand=Plus/Minus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 |||||||||||||| |||||||| ||||| |||||||||| ||||||||| |||| | || Sbjct 10806 TAGACCCGAAACCAGGTGATCTATCCATGTCCAGGATGAAAGTGCGGTAATACGCACCGG 10747 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 |||||||||||| | |||||||| | |||||||| ||||| ||| ||||||| | Sbjct 10746 AGGTCCGAACCCGTGTACGTTGAAAAGTGCTGGGATGAGGTGTGGATAGCGGTGAAATTC 10687 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTC--AAGT 210 |||| |||||||| |||||||||||||||||||| |||||| ||||| | | Sbjct 10686 CAAACGAACTTGGAGATAGCTGGTTCTCTCCGAAATAGCTTTAGGGTTAGCCTCGGATTT 10627 Query 211 ATCACCATCGGGGGTAGAG-CACTGTTATGGCTAGGGGGTC---ATTGCGACTTACCAAA 266 | | ||| || ||||||| ||||||| ||| | |||||| ||| || |||| || Sbjct 10626 AGAATCAT-GGAGGTAGAGCCACTGTT-TGGACAAGGGGTCCGTCTTG-GA-TTACTAAG 10571 Query 267 CCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAG 326 ||||||||||| | | | || || | ||||||| || ||| ||| |||| Sbjct 10570 TTCAGATAAACTCCGAATACCATTGATTTATATC-CGGGAGTCAGACGATGAGTGATAAG 10512 Query 327 GTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAA 386 ||| | ||| ||| ||| | || ||| | ||| ||||| ||| |||| ||||| Sbjct 10511 ATCCATCGTCGAAAGGGGAACAGCCCAGACCACCAGTTAAGGTCCCTAAATATATGCTAA 10452 Query 387 GTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATT 446 || || || | || |||| ||||| |||||||||||||| |||||||||| Sbjct 10451 GTGGAA--AAGGCGGTGGAGTTGCATAGACAACTAGGATGTTGGCTCAGAAGCAGCCA-C 10395 Query 447 CATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||||||||||||||| ||||||||||||||| Sbjct 10394 CATTTAAAGAGTGCGTAATAGCTCACTAGTCGAG 10361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689516432384