Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1655 174 3e-41 seq1620 122 2e-25 >seq1655 Length=5713 Score = 174 bits (192), Expect = 3e-41 Identities = 234/314 (75%), Gaps = 14/314 (4%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||| ||| |||||||||||||||||| | ||||| ||||| |||| Sbjct 4968 GGTGGATGCCT-GGCACCAGGAGGCGATGAAGGACGTAGCACGCTGCGAAAAGCTACGGG 4910 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| || | || |||||||||| |||| ||||||||||| ||||| || |||| Sbjct 4909 GAGCC-GCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGCAAGGGT 4851 Query 130 --CATTGCATGCTGAATACATAGGTATGCAAAG-CGAACGCGGCGAACTGAAACATCTAA 186 ||| ||| ||||||||||||| ||| || ||||| ||| |||||||||||||| | Sbjct 4850 ATCAT--CAT-CTGAATACATAGG-ATGATGAGGCGAACCCGGGGAACTGAAACATCTCA 4795 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||| ||| ||||||||| ||||| ||||||| |||||||||||||||| ||| Sbjct 4794 GTACCTGGAGGAAAAGACATCAATTGAGATTCTGCTAGTAGTGGCGAGCGAACGCGGAAC 4735 Query 247 AGCCTTTACGAGATAGTT-GAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGG 305 || | | | | || ||| || || ||| ||||||||| | ||||||| || Sbjct 4734 AGGC---CAGTGGTCTTTGGAAGAGA-AGCAGAACACTCTGGAAAGGGTGGCCATAGTGG 4679 Query 306 GTGATAGCCCCGTA 319 ||||||| |||||| Sbjct 4678 GTGATAGTCCCGTA 4665 >seq1620 Length=11727 Score = 122 bits (134), Expect = 2e-25 Identities = 185/259 (71%), Gaps = 11/259 (4%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAG-TAGCTTGCGAT 59 || || ||||||| ||||||||| | || |||||||||||| | || | |||| Sbjct 11503 AGGGCGCATGGTGAATGCCTTGGTACTAGGAGCCGATGAAGGACGGAACTAACAC-CGAT 11445 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||| ||||||| | | | |||||||||| |||||||||||||||||||||| Sbjct 11444 ATGCTTCGGGGAGCT-GTACGTAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCAA 11386 Query 120 CCCTTTGGGTCATTGCATGC-------TGAATACATAGGTAT-GCAAAGCGAACGCGGCG 171 | | | ||| || ||| ||||| ||||| | | | | ||||||| | Sbjct 11385 TCATCTTAGTCGATGGTTGCACGACAGTGAATTCATAGCTGTCGTGCGGTAAACGCGGGG 11326 Query 172 AACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGC 231 |||||||||||||||||| | |||||| ||||| || ||||||| |||||| ||| Sbjct 11325 AACTGAAACATCTAAGTACCCGCAGGAGTAGAAAAAAATTTCGATTCCCTAAGTAGCGGC 11266 Query 232 GAGCGAAATGGGATGAGCC 250 ||||||| |||| |||| Sbjct 11265 GAGCGAACGGGGAACAGCC 11247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918354575936