Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1135 450 4e-124 seq2923 293 8e-77 seq2776 275 2e-71 seq3034 257 5e-66 seq632 257 5e-66 seq627 257 5e-66 seq2884 188 2e-45 seq2693 185 3e-44 seq2436 86.0 2e-14 >seq1135 Length=1025 Score = 450 bits (498), Expect = 4e-124 Identities = 325/375 (87%), Gaps = 14/375 (4%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||||||| |||| ||||| |||||||||||||| | ||| | Sbjct 786 GTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGGCGATAC 727 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 726 CAAACCGAGGTCTAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 667 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct 666 GATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCT 607 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 606 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATG 547 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 546 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 487 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 486 CCGTTGACCCGCGCTTACTTGAATTTC-TCACTTTGACATTCAGAGCACTGGGCAGAAAT 428 Query 519 CACATTGCGTCAACA 533 ||||||| ||||||| Sbjct 427 CACATTGTGTCAACA 413 >seq2923 Length=1394 Score = 293 bits (324), Expect = 8e-77 Identities = 170/175 (97%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1393 AGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 1334 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 1333 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTGACCCGCGCTTACTT 1274 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1273 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 1219 >seq2776 Length=1037 Score = 275 bits (304), Expect = 2e-71 Identities = 160/165 (97%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 568 GACAGTAGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 509 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 508 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTGACCCGCGCTTACTTGAATTTCTTC 449 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 448 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 404 >seq3034 Length=1114 Score = 257 bits (284), Expect = 5e-66 Identities = 148/152 (97%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 383 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 324 Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 323 AGTCATAGTTACTCCCGCCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCA 264 Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||| ||||||| Sbjct 263 GAGCACTGGGCAGAAATCACATTGTGTCAACA 232 >seq632 Length=4389 Score = 257 bits (284), Expect = 5e-66 Identities = 148/152 (97%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1283 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 1342 Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 1343 AGTCATAGTTACTCCCGCCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCA 1402 Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||| ||||||| Sbjct 1403 GAGCACTGGGCAGAAATCACATTGTGTCAACA 1434 >seq627 Length=1055 Score = 257 bits (284), Expect = 5e-66 Identities = 148/152 (97%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 593 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 652 Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 653 AGTCATAGTTACTCCCGCCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCA 712 Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||| ||||||| Sbjct 713 GAGCACTGGGCAGAAATCACATTGTGTCAACA 744 >seq2884 Length=1250 Score = 188 bits (208), Expect = 2e-45 Identities = 170/215 (79%), Gaps = 13/215 (6%) Strand=Plus/Plus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||| ||| |||| ||||| |||||||||||||| | ||| | Sbjct 828 GTTCCATTTAATCAAGTAAATAAGGAAACAATAAGAGTAGTGGTATTTCATTGGCGATAC 887 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 888 CAAACCGAGGTCTTATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 947 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct 948 GATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCT 1007 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373 ||||||||||||||||||||||||||||||||||| Sbjct 1008 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 1042 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 523 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 582 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 583 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 629 >seq2693 Length=2190 Score = 185 bits (204), Expect = 3e-44 Identities = 158/196 (81%), Gaps = 13/196 (7%) Strand=Plus/Plus Query 191 GTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--CGAAACGG-----------C 237 |||| |||| ||||| |||||||||||||| | ||| | |||| | | Sbjct 625 GTAAGGAAACAATAAGAGTAGTGGTATTTCATTGGCGATACCAAACCGAGGTCTAATATC 684 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||||||||||||||| | ||| | ||| | | || ||||||||||||||| Sbjct 685 TCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCAGATTAGAGTCAAGCTCAAA 744 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 745 AGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 804 Query 358 TAGTAGATAGGGACAG 373 |||||||||||||||| Sbjct 805 TAGTAGATAGGGACAG 820 Score = 87.8 bits (96), Expect = 6e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 521 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 580 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112 ||| | |||||| ||||||||| ||||||||| ||||| |||||| Sbjct 581 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGT 626 >seq2436 Length=1051 Score = 86.0 bits (94), Expect = 2e-14 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 430 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 371 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| |||||| Sbjct 370 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGTAATGTC 324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635119123008