Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1655 361 2e-97 seq1620 158 4e-36 >seq1655 Length=5713 Score = 361 bits (400), Expect = 2e-97 Identities = 419/565 (74%), Gaps = 21/565 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||| ||| | ||||||||||| || ||| ||| || |||||| || | | || || Sbjct 2771 TCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTCC 2830 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| | ||||| ||| | | |||||||||||||| ||||||||| | |||||||||| Sbjct 2831 GACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTACACTTTGGGAGG-CGACCGCCCCAG 2889 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| ||||||| || ||||| | | | | | | ||| ||||||| ||| Sbjct 2890 TCAAACTGCCCACCATACAGGGTCCCGGATCAGGCTAACTGACCACGGTTAGACATCAGA 2949 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 | |||| |||||||||||| | | |||||||| ||| ||| | || ||| || Sbjct 2950 AAAATTCAGGGTGGTATTTCAAGGATGGCTCCACAAGGACTGGCGCCCCTGCTTCAAAGC 3009 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 ||||||||||||||||||| | | | |||||| | ||||| ||| ||||| | Sbjct 3010 CTCCCACCTATCCTACACAGAATGTCTCTGATGCCACTGTAAAGCTGCAGTAAAGGTTCA 3069 Query 301 G-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||| |||| ||||| | | ||||||| || | | | ||||||| | | Sbjct 3070 TAGGGTCTTTCCGTCTGACCGCGGATACCCCGCATCTTCACGGGGAATTCAATTTCGCTG 3129 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 ||| || | |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 3130 AGCCGATGCTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 3189 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 3190 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTC 3249 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 ||| ||| ||| ||||| ||||||||||||||| |||||| Sbjct 3250 AAT--------TCA-----------GTGCTCTCACACCTCCTCTTAACCTTCCGGCACCG 3290 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||| || ||||| ||| Sbjct 3291 GGCAGGCGTCAGGCCCTATACGTCG 3315 >seq1620 Length=11727 Score = 158 bits (174), Expect = 4e-36 Identities = 124/147 (84%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| |||| ||||||||||||||||||||| ||| |||||||| ||||| || Sbjct 8699 TCGACCTGTATGTCTCGCAGTCAAGCTCCCTTCTGCCTTTACACTCTATGAATGATTTCC 8758 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||| Sbjct 8759 AACCATTCTGAGGGAACCTTTGGGCGCCTCCGTTACTATTTGGGA-GGCGACCGCCCCAG 8817 Query 121 TTAAACTACCCACCAGGCACTGTCCCC 147 | ||||| || ||||| ||||||| || Sbjct 8818 TCAAACTGCCAACCAGACACTGTCTCC 8844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702315799296