Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3355 704 0.0 seq3412 390 3e-106 seq1171 379 6e-103 seq1005 282 1e-73 seq1088 269 8e-70 seq3394 96.9 1e-17 >seq3355 Length=1551 Score = 704 bits (780), Expect = 0.0 Identities = 462/504 (92%), Gaps = 7/504 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||| Sbjct 1489 GTACTCATTCCAATTACAAGACC--AAAG-GCCCTGTATCGTTATATATTGTCACTACCT 1433 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1432 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1373 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| Sbjct 1372 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTGAAAACCATGGTA 1313 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 1312 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCTCCGGCA 1253 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||| | |||| |||||||||||||||| ||| || |||| ||||| ||| | Sbjct 1252 CAAGGCCATGAGCTTCGAAAAGTTATTATGAATCATCAA-AAGGCCCG-AGGGCATTGAT 1195 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||| | ||||||||| ||| ||||||||||||||||| Sbjct 1194 TTTTTATCTAATAAATACACCCCTCCAAAAGTCGGGGCTTTACGCATGTATTAGCTCTAG 1135 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 | || |||||||||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct 1134 ATTTTCCACGGTTATCCATGTAGAACGGAACTATCAAATAAACGATAACTGATTTAATGA 1075 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||| Sbjct 1074 GCCATTCGCAGTTTCACCGTAT--AATGCTTATACTTAGACATGCATGGCTTAATCTTTG 1017 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 1016 AGACAAGCATATGACTACTGGCAG 993 >seq3412 Length=1072 Score = 390 bits (432), Expect = 3e-106 Identities = 407/520 (78%), Gaps = 22/520 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | ||||||| Sbjct 517 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTA 458 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 457 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 398 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 397 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 338 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| ||||||||||||||| | ||||||| || | ||| || Sbjct 337 GTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCATACATTTGAAAGATCTGTCGTCG 278 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA--CCAAGGAGCCCCGAA 290 | || | |||| ||| || | ||||| || | || || || || | | Sbjct 277 GTACATGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGA 219 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG--TCGGGGTTT-TTAGCA 346 || |||| |||| |||||||| ||| | || ||| || | ||| | ||| Sbjct 218 TCGC-TTGG-TTTTAGCCTAATAAAAGCACATGTCCCATAAGGTTCATGTTTTAATTGCA 161 Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAACG 404 ||||||||||||||||||||||| |||||||| ||| | || || ||| || ||| Sbjct 160 TGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGAACC 103 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||||||||| ||||||||| || || |||||||| | || | | | |||||||||||| Sbjct 102 ATAACTGATATAATGAGCCTTTTGCGGTTTCACT-TTTAATTCGTGTGTACTTAGACATG 44 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| ||||||||||| Sbjct 43 CATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 4 >seq1171 Length=1177 Score = 379 bits (420), Expect = 6e-103 Identities = 408/522 (78%), Gaps = 27/522 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | ||||||| Sbjct 560 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTA 501 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 500 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 441 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 440 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 381 Query 178 GTAGGCCACTATCCTACCAT-CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236 |||| || || ||||||| | ||||||||||||||||| ||||||| || | ||| | Sbjct 380 GTAGTCCTAGATACTACCATACAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTC 321 Query 237 GGCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA--CCAAGGAGCCCCGA 289 || || | |||| ||| || | ||||| || | || || || || | Sbjct 320 GGTACATGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCG 262 Query 290 AGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG--TCGGGGTTT-TTAGC 345 | || |||| |||| |||||||| ||| | || ||| || | ||| | || Sbjct 261 ATCGC-TTGG-TTTTAGCCTAATAAAAGCACATGTCCCATAAGGTTCATGTTTTAATTGC 204 Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAAC 403 |||||||||||||||||||||||| |||||||| ||| | || || ||| || ||| Sbjct 203 ATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGAAC 146 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACA 462 ||||||||| ||||||||| || || | |||||| || ||| | | |||||||||| Sbjct 145 CATAACTGATATAATGAGCCTTTTGC-GGTTCACTTTA---ATTCGTGTGTACTTAGACA 90 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| ||||||||||| Sbjct 89 TGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 48 >seq1005 Length=1057 Score = 282 bits (312), Expect = 1e-73 Identities = 217/257 (84%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | ||||||| Sbjct 306 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTA 247 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 246 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 187 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 186 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 127 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| ||||||||||||||||| ||||||| || | ||| || Sbjct 126 GTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 67 Query 238 GCTCAAGGCCATGCGAT 254 | || | |||| |||| Sbjct 66 GTACATGACCATACGAT 50 >seq1088 Length=1215 Score = 269 bits (298), Expect = 8e-70 Identities = 206/242 (85%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | ||||||| Sbjct 948 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTA 1007 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 1008 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 1067 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCC-TAATTCCCCGTTACCCGTTGATACCAT 176 |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| Sbjct 1068 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTTGATTCCCCGTTACCCGTTGCAACCAT 1127 Query 177 GGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236 ||||| || || |||||||| ||||||||||||||||| ||||||| || | ||| | Sbjct 1128 GGTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTC 1187 Query 237 GG 238 || Sbjct 1188 GG 1189 >seq3394 Length=1798 Score = 96.9 bits (106), Expect = 1e-17 Identities = 83/102 (81%), Gaps = 3/102 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | ||||||| Sbjct 1697 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTA 1756 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT 99 |||||||| | |||| |||||||||| |||||||||||||| Sbjct 1757 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCT 1798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510325295616