Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4563 419 2e-112 seq4471 392 3e-104 >seq4563 Length=5383265 Score = 419 bits (464), Expect = 2e-112 Identities = 1182/1798 (66%), Gaps = 43/1798 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || |||||||| || ||||| ||||| | ||| |||| ||||| ||||| ||||| Sbjct 4594968 TCCACGGTGAACTGAATGGCATTCGCAGCTGGCTTTGTCCGCAGATAATACATTCCGGTT 4594909 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 ||||| ||||| ||| | || || || || || | | |||| |||| || ||||| Sbjct 4594908 TTGAGCCCAGCTTTCCAGGAGTAAAAGTGTATGGACGTCAGTTTTCCATAGTTTGGCTCT 4594849 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 || ||||| ||||| || |||||||||||||| || |||| ||||||||| || ||||| Sbjct 4594848 GCTACATGTATATTAAAGGACTGACTCTGATCTATA-AACGCACCACGATCAGCGGCCAT 4594790 Query 65257 GTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| | ||| || | || || ||||| ||||| ||||| ||| ||| |||| Sbjct 4594789 TTTAATTGTG-GACTTCACAGAGATTTCCCAAACGGTTTTGTAAAGGTCACGAACCTTCT 4594731 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 |||||| |||||| | || | |||||| | | | ||| || | || ||| Sbjct 4594730 GTGGAATAGTCTCAATATTTTGAATTGAACCCCTGCTGGAAATGATTTGGTTCTTCATGT 4594671 Query 65376 ACTCTGACCACAAACCCAAATCGAT-AAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || |||||| ||| || | ||| | ||| || ||| | || | || ||| Sbjct 4594670 CATCGTCCCACAAGTCCAGCTCAGTCAAGTCCCTCAACAAA-TGATGGTTAACCACCTGG 4594612 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || ||||| ||||| || | | | ||| || || | || || || || ||||| Sbjct 4594611 AATTCGCCAGACAGAACTCTTCTGGTATAAATATTAGTAGTATACGGCTCGAAAGATTCG 4594552 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 ||||||| | ||| || ||||||||||| |||||||| ||||| |||| || ||||| Sbjct 4594551 TTGTTGCCCATAATCTGAGCAGTAGATGCTGTTGGCATAGGAGCAACCAGCAGGGAGTTC 4594492 Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCG----TCCCAGTTCCACATCGGTTT 65610 || | |||| | | | || ||| | || | | ||||| ||| | |||| Sbjct 4594491 CGGACACCGTGCTTCTTTATC----GACTCCTTTAGCTTTTGCCAGTCCCAGA--GGTT- 4594439 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 ||||| | | | |||||| || | |||| |||| | || |||| || Sbjct 4594438 --CGTCGGAA-CTTTGTCCCACATGTCGTACTGCAAAATTCCTTTGCTTACCGGGCTTCC 4594382 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 || | ||||| || || || || | || ||| |||| || | || | Sbjct 4594381 CTCATAAGTTTCGTATGGGCCTTCGATCTGAGCTAATTCACAACTGGCTTCCAAAGCCCC 4594322 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 | | ||||| || ||||| || | |||| | | || ||||| || || || || Sbjct 4594321 ATAGTAAATCGTTTCGAATATCTGCTGATTCAAGAGGCTCGCTTCATCACTTTCATATGG 4594262 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 | | ||| || | || | || || | || |||||||| || || | ||| ||||| Sbjct 4594261 GAATCGCATGAGAATTAATGCATCAGCAAAGCCCTGAACTCCGATGCCCACGGGGCGATG 4594202 Query 65851 ACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 | ||||||||| || ||||| || | || || | ||||||||||| || || Sbjct 4594201 CCTCAAATTGGACTTCCTTGCCTCTGGCAGCGGATAAAAGTTGATATCGATTATCTTGTT 4594142 Query 65911 CAAATTGCGTGTCACCA-CATGCACGATACGTCGC--AATTGTTCGAAATCAAAATGTTT 65967 | ||| | || ||| | || | || || | || || |||||| | ||| | Sbjct 4594141 GAGATTTCTGGTAACCGTCTTG---GTGACTTCCTTTAGTTTTTTGAAATCGTA-TGTCT 4594086 Query 65968 AGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027 || || ||| |||||| || ||| |||| ||||| | ||| || Sbjct 4594085 TT-----TCCGGTGTG---------ACAAACATGTTAAGAGCAATGGATGCCAAGTTACA 4594040 Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087 || || ||||| || || | || |||||||||||||| ||||||| |||||||| Sbjct 4594039 AACTGCAATCTCATCCGGGGAGGAGTACTCGACAATTTCTGTGCACAAGTTACTGCATTT 4593980 Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147 |||||||| | |||||| || |||||||| | ||||| ||||||||| | | ||| || Sbjct 4593979 AATGGTGCCAACATTCTGCTGGTTACTCTTCCTGTTGCAGGCATCCTTGAAGAGCATATA 4593920 Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207 |||| | || || || ||||| | ||||| |||||| ||| | | | ||||| || Sbjct 4593919 CGGATTTCCAGTTTCCACTTGTGCTTCAATAATGGCGAACCATAAGGATTGAGCCTTAAC 4593860 Query 66208 CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 || || || | || | | || || | | || | | ||| || || || Sbjct 4593859 TGTTCGGTTGGCACGGCCCTCTTGCTCATATTTCACATATAACTTTTCAAATTCATCGCC 4593800 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 |||||| ||| || | || || ||||| || ||||| || |||||||| |||| Sbjct 4593799 CCATACATCGTGAAGGCCAGGGCATTTGTGCGGGCACATAAGGGACCAATCTCCATTGGC 4593740 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 |||||||| ||| || |||||||||||||| | |||||| || ||||| || || || Sbjct 4593739 CTCTACACGTTTCATGAAAAGATCAGGTATCCACAAGGCGTAAAAAAGATCTCGGGCGCG 4593680 Query 66388 TTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 | ||| || |||| ||| ||||| | || || || ||||||| || | |||| Sbjct 4593679 ATTCTCTTCCTTGCCAGTG-TTTTTCTTGAGTTCCAGAAATTCAAAGACATCAGAGTGCC 4593621 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 | || |||||||| || || || | || ||| |||||||| || || || || || | Sbjct 4593620 AGGGCTCCAGGTAAATAGCAAAGGCTCCTGGACGCTTGCCGCCTCCCTGATCCACATAAC 4593561 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 | || || || |||||||| | || ||| || || || || || || | ||||| || | Sbjct 4593560 GCGCAACGTTATTGAAGACCCTCAGCATGGGAACCAGTCCATTGGAAGTTCCATTTGTTC 4593501 Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626 || || | | || ||| || ||| |||||||| || ||||| ||||| || | Sbjct 4593500 CGCATATCGAAGTACCCTTTGCTCGGATACAATGAACATTTAGTCCAATGCCACCAGCAG 4593441 Query 66627 TCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 || || || ||||| | |||| | | || ||||| || |||||||| | Sbjct 4593440 ATTTAGAAATCATGGCACATTGCTCCACAGACTTAAAAATGCCTTCGATGGAGTCGGCTG 4593381 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | ||||| | ||| | |||||| || || || |||||| || | || || | Sbjct 4593380 TCATGGTTAAAAGGAAACATGAAGATAGCTGCGGCCGATTTGTGGCTGCTGCAAAAAGCG 4593321 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | |||| || || || ||||| | |||| ||| ||||| || | | | || | Sbjct 4593320 TTGGTGATGCATGAGTGAAGTACCGCTCTGACAAAAGATTATACGTTTCTACGGCCGCGT 4593261 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 | || | ||| || || || |||| ||| ||||||| | | ||| |||||||| Sbjct 4593260 CGATATCTTCCCCGTGGATTCCGATCGCAACGCGCATCAACATATGTTGCGGCCGTTC 4593203 >seq4471 Length=3711889 Score = 392 bits (434), Expect = 3e-104 Identities = 599/846 (71%), Gaps = 13/846 (2%) Strand=Plus/Plus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| || |||||||||||||| |||||||| || ||| ||||||| || ||| |||| Sbjct 603513 AGGCTGAGGCTTCCTTCTGGACTGTGGAGGAAGTGGATCTGTCCAAGGATCTGACGGACT 603572 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 || | || || | || || | || ||||| ||| ||| |||| |||||||||| Sbjct 603573 GGCATCGCCTAAAGGACGACGAGCGTCACTTCATCTCACACGTGCTGGCCTTCTTTGCCG 603632 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGTGCAAGTG 61284 |||| || || ||||| || ||||| | | || || ||| || |||||||| || | Sbjct 603633 CTTCCGATGGAATCGTGAACGAGAACCTGGTTGAGCGATTTAGC-CAGGAGGTTCAGATC 603691 Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344 | ||||| || || |||||||| |||||||| || ||||| || || ||||| || ||| Sbjct 603692 ACTGAGGCACGCTGCTTCTACGGTTTCCAGATCGCAATGGAAAACGTGCACTCCGAAATG 603751 Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAAT 61404 || ||||| || ||||| || |||||| | || | | | || || |||||||| Sbjct 603752 TATAGTGTCCTGATCGACACATACATCCGAGATCCGCATCAGCGGGAGTACCTGTTCAAT 603811 Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC 61464 |||||||||||||| ||||| || ||||| || ||||| ||||| | |||||| | Sbjct 603812 GCCATCGAGACGATGCCGGCTGTAAAGCGCAAGGCGGACTGGGCGCTTTCCTGGATCTC- 603870 Query 61465 AGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTAT 61522 | ||| | || | ||||| || ||| | | || ||||| | || ||||| | | Sbjct 603871 -ATCCAAGTCAGCCAATTTTGGAGAGCGAATTATCGCCTTTGCCGCCGTAGAGGGCATCT 603929 Query 61523 TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTC 61582 | || || || || ||| | || || ||| | ||||||||||| || ||||| || | Sbjct 603930 TCTTTAGCGGCAGCTTCGCCTCTATTTTCTGGCTAAAGAAACGTGGCCTGATGCCGGGCC 603989 Query 61583 TGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTT 61642 |||| ||| ||| || | ||||| || ||||| ||| |||| || || ||||| || | Sbjct 603990 TGACATTCTCCAACGAACTTATATCCCGGGACGAAGGCTTGCACTGCGACTTTGCCGTCT 604049 Query 61643 TGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTC 61702 || | ||| | | | || ||| | || || | ||||| | |||||| | | Sbjct 604050 TGATGTTCCAGC---ACCTCGTGCAGCGACCAAAGCGAGAGCGCATCATCGAGATTATCC 604106 Query 61703 GTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCG 61762 | || ||||| | || || ||||| || || || || || | ||||| | |||| Sbjct 604107 GCGACGCGGTGGCCATTGAGCAGGAGTTCCTTACAGATGCCCTTCCCGTAAACTTGATCG 604166 Query 61763 GCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG 61822 |||||||||| | || ||||| ||||| || || ||||| || |||||| || |||| | Sbjct 604167 GCATGAATTGCGACCTGATGTCCCAGTACATCGAGTTTGTCGCAGACCGTTTGCTGGTGG 604226 Query 61823 A--TTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGAT 61880 | || | || ||| |||||| || || || ||||| || |||||||||| ||||| Sbjct 604227 AGCTTGGTGTTGGAA--AGATCTACAACACCAAGAACCCTTTCAATTTCATGGAGATGAT 604284 Query 61881 TTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAACGTTTGGG 61940 |||||||| || ||||| || || |||||||| || ||||| || || ||| |||| Sbjct 604285 CTCGCTGGACGGAAAGACAAACTTCTTCGAGAAGAAGGTGGGCGAGTACCAGCGTATGGG 604344 Query 61941 TGTAGC 61946 || || Sbjct 604345 AGTGGC 604350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397544034849440