Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq1094 80.6 8e-11 >seq1094 Length=12865 Score = 80.6 bits (88), Expect = 8e-11 Identities = 148/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 2682 CTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGA 2741 ||| || || | || || ||||| ||||| || |||| ||||| | || || ||||| Sbjct 8553 CTCCATTCTGGTGAAGGTCAACCAGATCGGCACGCTGACGGAAACGCTGGAAGCGATCGA 8494 Query 2742 AATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCA--CACCGTTCAGGTGAAACTGAA 2799 | || | |||| || |||||||| || ||| | || || || ||||| || ||| Sbjct 8493 GGTCGCTCATAAAGCAGGCTACACAGCCGT--TATGAGCCATCGCTCCGGTGAGACGGAA 8436 Query 2800 GATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCA 2859 || || | ||||| ||| | || ||||| || || ||||| || || || || || Sbjct 8435 GACTCGATCATCGCGGATCTAGCTGTTGCGACCAATTGCGGTCAGATCAAAACTGGCTCG 8376 Query 2860 TTGTCACGTACTGACCGTATTGCTAAATACAACCA 2894 | || || ||||| | | || ||||||||||| Sbjct 8375 CTCTCCCGCTCTGACAGAACCGCAAAATACAACCA 8341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156029235279624