Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq5583 206 5e-51 >seq5583 Length=19632 Score = 206 bits (228), Expect = 5e-51 Identities = 248/331 (75%), Gaps = 7/331 (2%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||||||||| |||| ||| |||||||||| ||||||||| Sbjct 13529 CCCGACGAGGGGAGTGAAATAGACC-TGAAACCGGATGCCTACAAGCAGTCGGAGCCTCT 13587 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || ||||||| Sbjct 13588 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCGAG 13645 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| ||| || || ||||||||| || || |||||| ||||||| Sbjct 13646 CTTAAGCCGAT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGTCGAGTTG 13701 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| | Sbjct 13702 CTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACAC 13761 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | |||||| ||||||| |||||||| | |||||| | || ||||||| Sbjct 13762 GCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAGTCGGGGATGAGCTGTGGCTAGGGGT 13821 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||| |||||||||| || Sbjct 13822 GAAAGGCCAATCAAACTCGGAAATAGCTGGT 13852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972744025088