Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04]
5,754 sequences; 152,439,475 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq4995 288 1e-75
seq4443 161 1e-37
seq1581 150 3e-34
seq4305 141 1e-31
seq5626 77.0 5e-12
>seq4995
Length=9752
Score = 288 bits (318), Expect = 1e-75
Identities = 204/229 (89%), Gaps = 5/229 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 5151 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 5208
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||||
Sbjct 5209 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 5268
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| |||||||| || | | |||||||||||||||||||
Sbjct 5269 ACCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 5326
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 5327 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 5375
>seq4443
Length=1220
Score = 161 bits (178), Expect = 1e-37
Identities = 179/228 (79%), Gaps = 12/228 (5%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| |
Sbjct 268 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 211
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118
| ||| | | |||| || || | | ||||| | || || || | |||| | |
Sbjct 210 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 154
Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
| |||||||||| |||| | ||| ||| || ||||| ||| ||| |||||||||||||
Sbjct 153 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTCATTGTAGCGCGCGTG 97
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
| |||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 96 CAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 50
>seq1581
Length=1158
Score = 150 bits (166), Expect = 3e-34
Identities = 178/229 (78%), Gaps = 13/229 (6%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| |
Sbjct 242 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 299
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118
| ||| | | |||| || || | | ||||| | || || || | |||| | |
Sbjct 300 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 356
Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176
| |||||||||| |||| | ||| ||| || ||||| ||| | || ||||||||||||
Sbjct 357 TTACCCGGACCTATCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 413
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|| |||||| |||||||||||||||||||| ||||||||| ||||| ||
Sbjct 414 GCAGCCCAGGACATCTAAGGGCATCACAGATCTGTTATTG-CTCAATCT 461
>seq4305
Length=6094
Score = 141 bits (156), Expect = 1e-31
Identities = 176/229 (77%), Gaps = 13/229 (6%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| |
Sbjct 252 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 195
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118
||| | | |||| || || | ||||| | || || || | |||| | |
Sbjct 194 TAAGTTCATGTG-AACAGTTTCAGTTCATAATCCCAAGCATGA--AAGTGGTTCAGCGGT 138
Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176
| ||||||||| |||| | ||| ||| || ||||| ||| | || ||||||||||||
Sbjct 137 TTACCCGGACCGCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 81
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|| |||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 80 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 33
>seq5626
Length=13510
Score = 77.0 bits (84), Expect = 5e-12
Identities = 131/179 (73%), Gaps = 12/179 (7%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||| |||
Sbjct 2057 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAA-TTC 2114
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCA-AAGA 117
||| | | |||| || || | | ||||| | || || || | |||| |
Sbjct 2115 GAAGTTCATG-TGAACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 2171
Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATAC-ATCAGTGTAGCGCGCG 175
|| ||||||||| |||| | || || | || ||||| |||| ||| |||||||||||
Sbjct 2172 TTTCCCGGACCTCTCGGTCTAG--GAAATACACGTTG-ATACTTTCATTGTAGCGCGCG 2227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751958082110
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |