Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4995 387 3e-105 seq1603 93.3 8e-17 seq1581 91.5 3e-16 >seq4995 Length=9752 Score = 387 bits (428), Expect = 3e-105 Identities = 270/304 (89%), Gaps = 5/304 (2%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || ||||||||| Sbjct 6094 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 6039 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 6038 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTGCTCGAATATATTAGCATGGAA 5979 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct 5978 TAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAAT 5919 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 5918 AGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 5859 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||||||||||||||||||| || ||||||| |||||||||||||| |||||||||||| Sbjct 5858 GACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 5800 Query 315 GGGG 318 |||| Sbjct 5799 GGGG 5796 >seq1603 Length=1096 Score = 93.3 bits (102), Expect = 8e-17 Identities = 174/248 (70%), Gaps = 21/248 (8%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 |||||||||| ||||||||||| | ||||||||| | | ||| | | ||| Sbjct 446 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTT-----CAAATGCCT-------GAA 399 Query 135 TAATA-GAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGATT 191 || | | | ||| | | ||||| ||| ||||||| || | | ||||||||| Sbjct 398 TATTCTGCA---GACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATGATT 343 Query 192 AATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 342 AATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCGTC 283 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||||||||| |||||||| || |||| ||||||||||||||||| |||||||| Sbjct 282 GTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACGAAA 224 Query 311 GTTAGGGG 318 ||||| || Sbjct 223 GTTAGAGG 216 >seq1581 Length=1158 Score = 91.5 bits (100), Expect = 3e-16 Identities = 103/137 (75%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 183 GTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||| ||| ||||| | |||||| | |||||||||||||| Sbjct 1130 GTAATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCT 1071 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||| |||||||||| |||||||| || |||| ||||||||||||||||| Sbjct 1070 TGGACCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCAA 1011 Query 302 TGAACGAAAGTTAGGGG 318 |||||||||||| || Sbjct 1010 GTAACGAAAGTTAGAGG 994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915147339392