Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq5583 113 4e-23 >seq5583 Length=19632 Score = 113 bits (124), Expect = 4e-23 Identities = 141/191 (74%), Gaps = 17/191 (9%) Strand=Plus/Plus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| || | |||||||| ||||||||| | ||||||||||| Sbjct 13077 GGCATTCGGTGGATGCCTTGGTACCAGGAGGCGATGAAGGACGTAGCACGCTGCGAAAAG 13136 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC------ 114 ||||||||| || | | ||||||||||||||||||||||||||||||| Sbjct 13137 CTACGGGGAGCCGCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGC 13196 Query 115 ---GATATATTGG--AGATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAA 169 | ||| ||| || ||| |||| ||| | |||||||| ||||||||||| Sbjct 13197 AAGGGTATCGTGGTCTGA-ATA-CATAGGACTACG----AGGCGAACCCGGGGAACTGAA 13250 Query 170 ACATCTAAGTA 180 |||||| |||| Sbjct 13251 ACATCTCAGTA 13261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476773422274