Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4995 325 6e-87 seq1581 161 2e-37 seq4443 98.7 2e-18 seq4305 93.3 7e-17 >seq4995 Length=9752 Score = 325 bits (360), Expect = 6e-87 Identities = 230/260 (88%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 5294 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 5353 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---A 118 |||||||||||||||||||||||| |||| ||| || ||||||||||||||||| | Sbjct 5354 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 5413 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 5414 ACCAGCAA--ATGCTAGCACCA-CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 5470 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 5471 TAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAA 5530 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 5531 GAAAGAGCTCTCAATCTGTC 5550 >seq1581 Length=1158 Score = 161 bits (178), Expect = 2e-37 Identities = 97/101 (96%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 647 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 706 Query 219 ACCACCACCCATAGAATCAAG-AAAGAGCTATCAATCTGTC 258 ||||||||||||||| || || ||||||||||||||||||| Sbjct 707 ACCACCACCCATAGATTCGAGTAAAGAGCTATCAATCTGTC 747 Score = 96.9 bits (106), Expect = 6e-18 Identities = 87/106 (82%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||| ||||||||| ||| Sbjct 398 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGATCTGTTATTG-CTC 456 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 457 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 500 >seq4443 Length=1220 Score = 98.7 bits (108), Expect = 2e-18 Identities = 85/102 (83%), Gaps = 5/102 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 113 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 55 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 || || ||| | ||| || || | | |||| | ||||||| Sbjct 54 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAG 15 >seq4305 Length=6094 Score = 93.3 bits (102), Expect = 7e-17 Identities = 82/99 (83%), Gaps = 5/99 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 96 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 38 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAG 112 || || ||| | ||| || || | | |||| | |||| Sbjct 37 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796755584874