Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4995 470 3e-130 seq1716 383 3e-104 seq1597 212 1e-52 seq1591 161 2e-37 >seq4995 Length=9752 Score = 470 bits (520), Expect = 3e-130 Identities = 281/295 (95%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 1202 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 1261 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1262 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1321 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 1322 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 1381 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1382 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 1441 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1442 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1496 >seq1716 Length=11115 Score = 383 bits (424), Expect = 3e-104 Identities = 262/294 (89%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||| || | | | | || | |||||||||||||||||||||||||||| Sbjct 966 TACTGAGCAGAATTGCCGTAGCGACAACCTTTCATCAGTAGGGTAAAACTAACCTGTCTC 1025 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct 1026 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGTG 1085 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1086 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 1145 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| |||| || || Sbjct 1146 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCCCTTGCG 1205 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 || || | ||| || | |||||||||||||||||| |||||| ||| ||||||| Sbjct 1206 TCGAACTCCGACGGTCAAAAGGATCGATAGGCCACGCTTTCACGGTCTGTATTC 1259 >seq1597 Length=1014 Score = 212 bits (234), Expect = 1e-52 Identities = 165/193 (85%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 81 ACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAG 140 ||||||||| | ||||||||||||||||||||| ||||| |||||| ||||||| Sbjct 1 ACGTTCCCTTGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAG 59 Query 141 GAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAG 200 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct 60 GAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAG 119 Query 201 CCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAA 259 |||||||||||| |||||||||||||| ||||||| | | ||| || | | ||| Sbjct 120 CCAGTTATCCCTATGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAA 178 Query 260 GGATCGATAGGCC 272 ||||||||||||| Sbjct 179 GGATCGATAGGCC 191 >seq1591 Length=1283 Score = 161 bits (178), Expect = 2e-37 Identities = 120/138 (87%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| Sbjct 1283 GATAGGAAGAGCCGACATCAAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCC 1224 Query 196 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA- 254 ||||||||||||||||| |||||||||||||| ||||||| | | ||| || | Sbjct 1223 ACAAGCCAGTTATCCCTATGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAAC 1165 Query 255 CTAAAGGATCGATAGGCC 272 | |||||||||||||||| Sbjct 1164 CAAAAGGATCGATAGGCC 1147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854350837824