Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq5583 441 3e-121 >seq5583 Length=19632 Score = 441 bits (488), Expect = 3e-121 Identities = 458/592 (77%), Gaps = 19/592 (3%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| | ||| |||| | ||| | |||| | ||| ||| | |||||| || ||||| Sbjct 14014 TCGACAATGGACCTTAG-CACCCACTGTCTGTCTGCCAGGCTAT-ACTTCCGGGTATTCG 13957 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCC-TAGACCATCCAGTGCTCTACCTCC 119 |||||||||| || |||||| | ||||||||| ||| ||||||||||||||||| || Sbjct 13956 GAGTTTGGTTAGGTTTGGTAAGGCTTTGGGCCCCCCTAGCCCATCCAGTGCTCTACCCCC 13897 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || ||| || |||| | |||| ||| |||||| |||||||||||||| | || Sbjct 13896 CGGGGTAAATACCTGACGGTCTACCTCAATAGATTTCGCGGAGAACCAGCTATTTCCGAG 13837 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| |||||| |||||||| |||||||| |||||| Sbjct 13836 TTTGATTGGCCTTTCACCCCTAGCCACAGCTCATCCCCGACTTTTTCAACAGGCGTGGGT 13777 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||| |||||| || ||||| ||||| |||| |||||| ||||||||| | || Sbjct 13776 TCGGCCCTCCAGTGCGTGTTACCGCACCTTCAGCCTGGCCATGGCTAGATCACTCGGTTT 13717 Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359 |||||||| | || |||| ||||||||||| ||||||||||||||||| |||| || Sbjct 13716 CGGGTCTTCTGCCAGCAACTC-GACGCCCTATTCAGACTCGCTTTCGCTACGCCTACACC 13658 Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 ||| |||| ||||| || ||| |||||||| | | |||| | ||||||| ||||| Sbjct 13657 TATCGGCTTAAGCTCGCTGCA-AACAGAAACTCGCTGACCCATTATACAAAAGGTACGCC 13599 Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479 |||||| | ||| || |||||||| | ||||||||| |||||||||| Sbjct 13598 GTCACC----CCATAAGAG--------GCTCCGACTGCTTGTAGGCATCCGGTTTCAGGT 13551 Query 480 ACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTA 538 |||||||||||||| | ||||| |||||||||||||||||||||||||||| | ||| Sbjct 13550 -CTATTTCACTCCCCTCGTCGGGGTGCTTTTCACCTTTCCCTCACGGTACTTGTTCACTA 13492 Query 539 TCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 |||||||||| ||||||||||||||| |||||||||| ||| |||| || Sbjct 13491 TCGGTCACCAGGGAGTATTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGAC 13440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817495415296