Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq5583 365 1e-98 >seq5583 Length=19632 Score = 365 bits (404), Expect = 1e-98 Identities = 338/415 (81%), Gaps = 19/415 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| || ||||||||||| | || ||||||| |||||||| || ||| Sbjct 13813 CCACAGCTCATCCCCG--ACTTTTTCAACAGGCGTGGGTTCGGCCCTCCAGTGCGT-GTT 13757 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||||| || |||| |||| || |||||| | |||||| ||||||| | | ||||| Sbjct 13756 ACCGCACCTT-CAGCCTGGCCAT-GGCTAGATCACTCGGTTT-CGGGTCT-TCTGCCAGC 13701 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTT 187 ||| ||||||||| | ||||||||||| |||||||||| | ||||| | ||||||| Sbjct 13700 AACTCGACGCCCTATTCAGACTCGCTTT-CGCTACGCCTACACCTATCGGCTTAAGCT-- 13644 Query 188 GCCACTGAAAATA---AGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 | ||| ||| | | |||||||||||||||||||||||||||| ||||||| | || Sbjct 13643 --CGCTGCAAACAGAAACTCGCTGACCCATTATACAAAAGGTACGCCGTCACCCCATAAG 13586 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 |||||| |||||||||| |||| |||||||||| ||||||||||||||||| |||| Sbjct 13585 A--GGCTCCGACTGCTTGTAGGCATCCGGTTTCAGG-TCTATTTCACTCCCCTCGTCGGG 13529 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| |||||||||||||||||| ||||||||||||||| | ||||||||| Sbjct 13528 GTGCTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCACCAGGGAGTATTTAGG 13469 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||||| |||||||||||| |||||||| ||||| ||||| ||| ||||||| Sbjct 13468 CTTGGAGGGTGGTCCCCCCATGTTCAGACAGGGTTTCACGTGCCCCGCCCTACTC 13414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241528558336