Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq5583 306 6e-81 >seq5583 Length=19632 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| |||||||||||| |||||||| ||| | Sbjct 15690 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCATACTTAGCTACCCGG 15631 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 15630 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 15571 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 15570 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 15511 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 15510 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 15451 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 15450 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 15417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780756476744