Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq5583 358 2e-96 >seq5583 Length=19632 Score = 358 bits (396), Expect = 2e-96 Identities = 370/478 (77%), Gaps = 6/478 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| | ||| ||||| | |||||||||||| ||||||||| |||| Sbjct 13677 CGAGTCTGAATAGGGCGTCGAGTTGCTGGCAGAAGACCCGAAACCGAGTGATCTAGCCAT 13736 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 ||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||| Sbjct 13737 GGCCAGGCTGAAGGTGCGGTAACACGCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAG 13796 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 | ||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||| Sbjct 13797 TCGGGGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTGGTTCTC 13856 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTA-TCACCATCGGGGGTAGAGCACTGTTATG 239 ||||| ||||| |||||| | ||| ||| | ||| ||||||||||||||| | Sbjct 13857 CGCGAAATCTATTGAGGTAGACCGTCAGGTATTTACCCCGGGGGGTAGAGCACTGGATGG 13916 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||||||||| | | ||||||||||| |||||||||||| | | || | || Sbjct 13917 GCTAGGGGGGCCCAAAGCCTTACCAAACCTAACCAAACTCCGAATACCCGGAAG-TATAG 13975 Query 300 CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTAT 359 | || || || ||||||||||||||| | ||||||| || | || ||| | Sbjct 13976 CCTGGCAGACAGACAGTGGGTGCTAAGGTCCATTGTCGAGAGGGAAACAGCCCAGACCAC 14035 Query 360 CAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGC 419 ||||||||||||| |||| ||||||| | || || || | | | || ||| | Sbjct 14036 CAGCTAAGGCCCCTAAATCGTGGCTAAGTGGGA--AAGGATGTGGGGATTCCAAAACAAC 14093 Query 420 TAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 |||| |||||||| |||||||||| || |||||||| |||||| |||||||| ||| Sbjct 14094 CAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAATAGCTCACTGGTC 14150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689502780416