Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq5583 181 2e-43 >seq5583 Length=19632 Score = 181 bits (200), Expect = 2e-43 Identities = 233/315 (74%), Gaps = 15/315 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTAC----AGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 |||||||||||||| ||| |||||||||||||||||| | ||||| ||||| Sbjct 13084 GGTGGATGCCTTGG----TACCAGGAGGCGATGAAGGACGTAGCACGCTGCGAAAAGCTA 13139 Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTT 125 ||||||| || | || |||||||||| |||| ||||||||||| ||||| || Sbjct 13140 CGGGGAGCC-GCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGCAA 13198 Query 126 GGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTA 185 |||| || | ||||||||||||| | | | |||||| ||| |||||||||||||| Sbjct 13199 GGGT-ATCGTGGTCTGAATACATAGGACTACGAGGCGAACCCGGGGAACTGAAACATCTC 13257 Query 186 AGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGAT 245 |||| ||| ||||||||| ||||| ||||||| |||||||||||||||| ||| Sbjct 13258 AGTACCTGGAGGAAAAGACATCAATTGAGATTCTGCTAGTAGTGGCGAGCGAACGCGGAA 13317 Query 246 GAGCCTTTACGAGATAGTT-GAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCG 304 || | | | | || ||| || || ||| ||||||||| | ||||||| | Sbjct 13318 CAGGC---CAGTGGTCTTTGGAAGAGA-AGCAGAACACTCTGGAAAGGGTGGCCATAGTG 13373 Query 305 GGTGATAGCCCCGTA 319 |||||||| |||||| Sbjct 13374 GGTGATAGTCCCGTA 13388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918347155264