Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq5583 361 2e-97 >seq5583 Length=19632 Score = 361 bits (400), Expect = 2e-97 Identities = 419/565 (74%), Gaps = 21/565 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||| ||| | ||||||||||| || ||| ||| || |||||| || | | || || Sbjct 15282 TCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTCC 15223 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| | ||||| ||| | | |||||||||||||| ||||||||| | |||||||||| Sbjct 15222 GACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTACACTTTGGGAGG-CGACCGCCCCAG 15164 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| ||||||| || ||||| | | | | | | ||| ||||||| ||| Sbjct 15163 TCAAACTGCCCACCATACAGGGTCCCGGATCAGGCTAACTGACCACGGTTAGACATCAGA 15104 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 | |||| |||||||||||| | | |||||||| ||| ||| | || ||| || Sbjct 15103 AAAATTCAGGGTGGTATTTCAAGGATGGCTCCACAAGGACTGGCGCCCCTGCTTCAAAGC 15044 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 ||||||||||||||||||| | | | |||||| | ||||| ||| ||||| | Sbjct 15043 CTCCCACCTATCCTACACAGAATGTCTCTGATGCCACTGTAAAGCTGCAGTAAAGGTTCA 14984 Query 301 G-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||| |||| ||||| | | ||||||| || | | | ||||||| | | Sbjct 14983 TAGGGTCTTTCCGTCTGACCGCGGATACCCCGCATCTTCACGGGGAATTCAATTTCGCTG 14924 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 ||| || | |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 14923 AGCCGATGCTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 14864 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 14863 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTC 14804 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 ||| ||| ||| ||||| ||||||||||||||| |||||| Sbjct 14803 AAT--------TCA-----------GTGCTCTCACACCTCCTCTTAACCTTCCGGCACCG 14763 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||| || ||||| ||| Sbjct 14762 GGCAGGCGTCAGGCCCTATACGTCG 14738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702302043904