Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5351 448 4e-121 seq5380 374 7e-99 >seq5351 Length=991022 Score = 448 bits (496), Expect = 4e-121 Identities = 609/845 (72%), Gaps = 11/845 (1%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| || || || |||||||| ||||||||||| || ||||||| ||| ||| |||| Sbjct 258092 AGGCTGAGGCCTCTTTCTGGACCGTGGAGGAGGTGGACCTGTCCAAGGACCTGACCGACT 258033 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 || | || || | || || | || || ||| || |||||||| ||||| || | Sbjct 258032 GGCACCGCTTGAAGGACGACGAGCGCCACTTTATTTCGCACGTGTTGGCCTTCTTCGCAG 257973 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 | || || || || |||||||||||| | |||| || ||| ||||||||||| | Sbjct 257972 CCTCCGATGGCATTGTCAATGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGATCA 257913 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | ||||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct 257912 CAGAGGCCCGCTGCTTCTACGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 257853 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 ||||||| || ||||| || |||||| | || | | | || || ||||||| | Sbjct 257852 ACAGTGTGCTGATCGACACATACATCCGCGATCCGCACCAGCGAGAGTACCTGTTCAACG 257793 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465 ||||||| ||||| |||||||||||||| || || || |||||| | |||||| || Sbjct 257792 CCATCGAAACGATGCCGGCGGTGAAGCGCAAGGCTGACTGGGCCATGTCCTGGATCTCC- 257734 Query 61466 GTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 | ||| | || | || || || || | | || ||||| | || || || | || Sbjct 257733 -TCCAAGTCAGCCAACTTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGAAGGCATCTT 257675 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 ||||| || || ||| | || || ||| ||||||| || || || ||||| || || Sbjct 257674 CTTCAGCGGCAGCTTCGCCTCCATTTTCTGGCTGAAGAAGCGAGGCCTGATGCCGGGACT 257615 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTT 61643 ||||||| ||| ||| |||| ||| | |||||||| ||||||| ||||| || || | Sbjct 257614 GACCTTCTCCAACGAGCTGATCTCAAGGGACGAGGGTCTGCATTGCGATTTCGCAGTGCT 257555 Query 61644 GCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCG 61703 | | ||| | | | || ||| | || || | ||||| | ||| || |||| Sbjct 257554 GATGTTCCAGC---ACCTTGTGCAGCGACCCAAGCGAGAGCGCATCATTGAAATCATTCG 257498 Query 61704 TGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGG 61763 || ||||| | || || ||||| || || || || || |||| || || ||||| Sbjct 257497 CGATGCGGTGGCCATTGAGCAGGAGTTCCTCACCGATGCCCTGCCAGTGAACCTTATCGG 257438 Query 61764 CATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGA 61823 ||||||||| | || |||||||||||||| || || || ||||||||| || |||| || Sbjct 257437 CATGAATTGCGATCTGATGTCGCAGTATATCGAGTTCGTGGCCGACCGTTTGCTGGTGGA 257378 Query 61824 TTTGG--GTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATT 61881 |||| || ||| |||||| || || || ||||| ||| | |||||||| |||||| Sbjct 257377 GTTGGGCGTTGGAA--AGATCTACAACACCAAGAACCCCTTTAACTTCATGGAGATGATT 257320 Query 61882 TCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAACGTTTGGGT 61941 |||||||| |||||||| || ||||||||||| || ||||| || || || |||| Sbjct 257319 TCGCTGGACGGCAAGACAAACTTTTTCGAGAAGAAGGTTGGCGAATACCAGCGCATGGGA 257260 Query 61942 GTAGC 61946 || || Sbjct 257259 GTGGC 257255 >seq5380 Length=870010 Score = 374 bits (414), Expect = 7e-99 Identities = 1211/1862 (65%), Gaps = 51/1862 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || |||||||| || || || || |||| ||| || | ||||||||||| ||||| Sbjct 557589 TCCACGGTGAACTGAATGGCGTTTGCTGCCGGCTTTGTGCGCAGATAGTACATTCCGGTT 557648 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || || ||||| ||| | || || || || || | | ||| | || || ||||| Sbjct 557649 TTAAGCCCAGCTTTCCAGGAGTAAAAGTGTATGGACGTAAGCTTTCCGTAGTTTGGCTCT 557708 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 |||||||| || || || ||||| || ||||||||| || ||| ||||| || ||||| Sbjct 557709 GCCACATGAATGTTGAAGGACTGGCTTTGATCGATGAAAGCACCTCGATCAGCGGCCATT 557768 Query 65258 TCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 | ||| || ||| || | || || ||||| ||||| ||||| || || |||| Sbjct 557769 TTAATAGTA-GACTTCACAGAGATTTCCCACACGGTTTTGTAAAGATCTCGGACCTTCTG 557827 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376 || || | || |||| || | || || | | | ||| || | || ||| Sbjct 557828 CGGGATGGCTTCGATGTTTTGAATGGAGCCCCTGCTGGAAATTATTTGGTTCTTCATATC 557887 Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436 || |||||| |||| || | || | | ||||||| | |||| ||||| || Sbjct 557888 ATCGTCCCACAAGTCCAATTCAGTCAGGTCCCTCAACAAGTGATGGTTGACCACTTGAAA 557947 Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496 ||||||||||| || || | || || || | ||| || || || ||||| | Sbjct 557948 TTCGCCGGACAGAACTCGTCTAGTGTAAATATTAGTCGTATACGGCTCGAAAGATTCGTT 558007 Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556 |||||| | ||| ||||||||||||||||| ||||| ||||| || | || ||||| | Sbjct 558008 GTTGCCCATAATCTGGGCAGTAGATGCAGTGGGCATAGGAGCCACAAGCAGGGAGTTCCT 558067 Query 65557 CAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTC 65616 | |||| | | | || | || || | ||||| ||||| |||| | | | Sbjct 558068 GACACCGTGCTTCTTGATCGACTCCTTCAGTTTCTGCCAGTCCCACA--GGTTCGTTGGC 558125 Query 65617 GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAA 65676 | | | |||||| || | ||||| | || |||| | || || | Sbjct 558126 GTTTT----GTCCCACATGTCGTACTGCAGAATACCCTTACTTACGGGGCTCCCTTCATA 558181 Query 65677 ACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATA 65736 | ||||| || || || || || | ||| |||| ||| | ||| | | || Sbjct 558182 GGTTTCGTATGGACCATCAATCTCAGCCAGCTCACAACTGGCCTCCAAAGCGCCGTAGTA 558241 Query 65737 AATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACC 65796 ||| || || || || | |||| | || || || || || || || || | | Sbjct 558242 AATAGTTTCAAATATCTGCTGATTCAAAAGACCAGCTTCTTCACTTTCATAGGGGAATCG 558301 Query 65797 CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAA 65856 ||| || | || | ||| || | ||| |||||||| || || | ||| ||||| | ||| Sbjct 558302 CATGAGAATCAAGGCGTCAGCGAAACCCTGAACTCCGATGCCCACGGGGCGATGTCTCAA 558361 Query 65857 ATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATT 65916 |||||| | ||||| || | || || || || |||||||| || || | ||| Sbjct 558362 ATTGGATTTCTTTGCCTCCGGCAGGGGATAATAGTTTATATCGATTATCTTGTTAAGATT 558421 Query 65917 GCGTGTCACCA-CATGCACGATACGTCGC--AATTGTTCGAAATCAAAATGTTTAGGACG 65973 || ||| | || | || || | || | |||||| | || Sbjct 558422 TTTGGTGACCGTCTTG---GTAACTTCTTTTAGTTTCTTGAAATCGTACGTCTTC----- 558473 Query 65974 ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGC 66033 ||||| ||| || ||| || |||||| | ||||| | |||||| || || Sbjct 558474 -TCGGGTGTGACGAACA---------TGTTAAGGGCGATGGATGCCAAGTTGCATACTGC 558523 Query 66034 TATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGT 66093 ||||| || || || | ||||| || ||||| ||||| || || ||||| || || Sbjct 558524 AATCTCATCTGGCGCAGAGTACTCTACGATTTCTGTGCAAAGGTTGCTGCACTTGATAGT 558583 Query 66094 GCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153 ||| | |||||| || || ||||| || ||||| ||||| || | | ||| || ||| | Sbjct 558584 GCCAACATTCTGCTGGTTGCTCTTCCGGTTGCAGGCATCTTTAAAGAGCATATAAGGATT 558643 Query 66154 GCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACG 66213 || || || || || | |||||| || ||| ||| | | | ||||| || || Sbjct 558644 TCCCGTTTCCACCTGCGCCTCAATAATCGCGAACCACAAGGACTGAGCCTTAACTACTCG 558703 Query 66214 TACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATAC 66273 || | ||| | | ||||| | ||| || | ||| || || ||||| || Sbjct 558704 GTTGGCACGACCCTCTTGCTCGTACTTCAAGTACAGCTTTTCAAATTCGTCGCCCCAAAC 558763 Query 66274 TTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTAC 66333 ||| || | || || || || |||||||| || |||||||| | | ||||| Sbjct 558764 ATCGTGAAGGCCGGGGCATTTATGAGGACACATGAGGGACCAATCCTCGTTGGCCTCTAC 558823 Query 66334 ACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTC 66393 ||| ||| || ||||| |||||||| | ||||||||| | |||||||| || | ||| Sbjct 558824 ACGTTTCATGAAGAGATCGGGTATCCACAAGGCGTAGAATAAGTCGCGTGCACGATTCTC 558883 Query 66394 CTCAATGCCG-TGATTTT--TGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450 || | ||| || |||| || || ||||||||||| |||| || | ||||||||| Sbjct 558884 TTCCTTTCCGGTGTTTTTCTTGAGC---TCGAGGAACTCGAAGACATCCGAATGCCATGG 558940 Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 |||||||| || || || | ||| ||| |||||||| || || || || || || || Sbjct 558941 CTCCAGGTAAATAGCAAAGGCGCCAGGACGCTTGCCGCCTCCCTGATCCACATACCGTGC 559000 Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570 || ||||| ||||| | || ||| || || || || || || |||||||||||||| Sbjct 559001 AACGTTGTTAAAGACCCTCAGCATGGGAACCAGACCATTGGAGGTGCCATTGGTGCCGCA 559060 Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 || | || || |||||| || || |||||||| ||||||||||| |||| || Sbjct 559061 AATCGAGGTGCCCTTTGCCCGAATGCAATGCACATTCAGTCCAATACCACCTGCCGATTT 559120 Query 66631 CGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690 || || || || | |||| | ||| ||||| || || ||||| || | || Sbjct 559121 TGAAATCATGGCGCACTGCTCCACGGATTTGAAAATGCCCTCGATCGAGTCGGCCGTCAT 559180 Query 66691 GGTCAGGAGGTAGCATGA--ACTA-AGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 ||||| |||| | || || || | || || | || |||||| || | || || || Sbjct 559181 GGTCAAGAGGAAACACGAAGACAACTGTGGGCGATT---TGTGGCAGCGGCAAAAAGAGT 559237 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGC-GAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 || | || || |||||| ||| || |||| |||||| || || | |||||| Sbjct 559238 TGGCGAGGCATGAGTAAAG-AATCGCTCGGACAAAAGATTGTAGGTTTCCACAGCAGCAT 559296 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTT--- 66863 | || | || || || || || | ||| ||||||| | | ||| || || | Sbjct 559297 CGATATCCTCTCCGTGGATTCCAATTGCCACGCGCATCAACATATGTTGTGGGCGCTCAG 559356 Query 66864 CGA-CCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922 ||| | ||| ||| | || || || || || ||||| |||||||| | |||||| Sbjct 559357 CGATCTTTCCGTTCC-TCTTAAGC---AAATATGATCGTTCGAGGGTCTTAAAACCAAAA 559412 Query 66923 TA 66924 || Sbjct 559413 TA 559414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397540119798560