Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq17438 102 3e-16 >seq17438 Length=17193109 Score = 102 bits (112), Expect = 3e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774 ||||||| || |||| || || |||||||||||| |||| | |||||||| || Sbjct 7488558 AGATGCGCTCGCAAATGAACTGTGCTATGCGATCGCCACGCTTTACCTCAAAGTCGGCGT 7488617 Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834 | || |||||||| || || || || | ||||| | ||| ||| || ||||||| Sbjct 7488618 CCGAATGGTTGAACAGGACAACACCCAGGTTGCCGCGGTAATCCTCGTCTACAACCCCGG 7488677 Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTAGT 21894 |||| || |||| |||||||| |||||| ||||| | || || || ||||| ||| Sbjct 7488678 CGCCTACATCGATGAAGTTCTTCACGGCCAGGCCCGAACGTGGCGCCACTCGGCCATAGG 7488737 Query 21895 GGCCCT 21900 ||||| Sbjct 7488738 AGCCCT 7488743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084262003197120