Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq4953 159 7e-37 >seq4953 Length=802672 Score = 159 bits (176), Expect = 7e-37 Identities = 234/325 (72%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| ||||||||| |||| | || | |||||||||| || ||||| | | | | Sbjct 221131 AGGGGAGTGAAATAGTTCCTGCAACCATGTGCCTACAAGCAGTTAGAGCCCATTTAAG-G 221073 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | ||||| || ||||||| | || | || |||||||| Sbjct 221072 GTGATAGCGTGCCTCTTGTAGAATGAACCGGCGAGTTA-TAGTTGCATGCAAGGTTAAG- 221015 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGA-GTTGGTGGCG 189 || | || |||||||| ||||||||| || || |||||| || || || || Sbjct 221014 -CTGAAAAAGCGG-AGCCGAAGCGAAAGCGAGTCTGAATAGGGCGTTGAAGTATGTTGCC 220957 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||| ||| | |||| |||| ||||||| || | Sbjct 220956 ATAGACCCGAAACCAGGTGATCTATCCATGTCCAGGATGAAAGTGCGGTAATACGCACCG 220897 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| ||||||| || |||||||||||| | |||||| | || ||| ||||||| Sbjct 220896 GAGGTCCGAACCCGTGTACGTTGAAAAGTGCTGGGATGAGGTGTGGATAGCGGTGAAATT 220837 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 |||| | |||| ||| |||||| || Sbjct 220836 CCAAACGAACTTGGAGATAGCTGGT 220812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972749988352