Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3756 120 1e-24 seq1680 120 1e-24 >seq3756 Length=1117 Score = 120 bits (132), Expect = 1e-24 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | || || |||||||||||||||||||||| | ||| ||| ||||| ||| | Sbjct 362 GAGCAGATATGCTGTGACCCGAAAGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGG 421 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||| | || | | |||||| ||||||||||||| |||| | ||| ||| Sbjct 422 GAAACCCTGATGGAAGACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTA 481 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 482 TAGGGGCGA 490 >seq1680 Length=1027 Score = 120 bits (132), Expect = 1e-24 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| |||| |||||| | | |||||| |||||| Sbjct 161 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAAACTAAAT 220 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||| ||||||| |||| ||||| ||||||| ||| || | Sbjct 221 ATAACCATGAGACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAAT 280 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 ||||||||||| || |||||||| || | | ||| Sbjct 281 AGAGAGTTAAACAGTACGTGAAACTGCTTAGAGG 314 Score = 120 bits (132), Expect = 1e-24 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | || || |||||||||||||||||||||| | ||| ||| ||||| ||| | Sbjct 860 GAGCAGATATGCTGTGACCCGAAAGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGG 919 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||| | || | | |||||| ||||||||||||| |||| | ||| ||| Sbjct 920 GAAACCCTGATGGAAGACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTA 979 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 980 TAGGGGCGA 988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079889725550