Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq4953 298 1e-78 >seq4953 Length=802672 Score = 298 bits (330), Expect = 1e-78 Identities = 233/278 (84%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||| ||||||||| || | |||||||| ||||||| || ||||||| Sbjct 219601 CGCGGGTAACCTGCTTCTTCACAGGTATCTTAATTTCACCGAGTCTCTCGTTGAGACAGT 219660 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 219661 GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 219720 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| |||||||| | ||||||||| | Sbjct 219721 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCATTTCGGAGCTTCGCCGAA 219780 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 |||||| | || |||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct 219781 GCTAACTCTTCCACTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCCTATACGTCATCTT 219840 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || |||||||| |||||||||| ||||||||||| Sbjct 219841 ACGATTTTGCAGAAACCTGTGTTTTTGATAAACAGTCG 219878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260735182272